RNA–Protein interactions for RNA: ENST00000561423.2

PRKXP1-201, Transcript of PRKX pseudogene 1, humanhuman

BASIC

Gene PRKXP1, Length 1,122 nt, Biotype processed pseudogene, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKXP1-201ENST00000561423 LHPPQ9H008 270 aa13.55□□□□□ -0.24
PRKXP1-201ENST00000561423 EPS8L2Q9H6S3 715 aa13.55□□□□□ -0.24
PRKXP1-201ENST00000561423 ENAMQ9NRM1 1142 aa13.55□□□□□ -0.24
PRKXP1-201ENST00000561423 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.55□□□□□ -0.24
PRKXP1-201ENST00000561423 NXT1Q9UKK6 140 aaKnown RBP13.55□□□□□ -0.24
PRKXP1-201ENST00000561423 LRBAP50851 2863 aa13.55□□□□□ -0.24
PRKXP1-201ENST00000561423 CACNA1DQ01668 2161 aa13.55□□□□□ -0.24
PRKXP1-201ENST00000561423 PCM1Q15154 2024 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 ARHGAP10A1A4S6 786 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 GRID2IPA4D2P6 1211 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 FITM1A5D6W6 292 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 VSTM2BA6NLU5 285 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 IQCF5A8MTL0 148 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 CTSVO60911 334 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 KLHL18O94889 574 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 MED26O95402 600 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 PIM1P11309 404 aaPredicted RBP13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 CYLC1P35663 651 aaPredicted RBP13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 CETN2P41208 172 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 PER3P56645 1201 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 KLF1Q13351 362 aaPredicted RBP13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 GRM7Q14831 915 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 TLR1Q15399 786 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 ZC3H12BQ5HYM0 836 aaKnown RBP13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 TSTD2Q5T7W7 516 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 YOD1Q5VVQ6 348 aaPredicted RBP13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 AFTPHQ6ULP2 937 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 LINC00696Q6ZRV3 163 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 CATSPER1Q8NEC5 780 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 CFAP61Q8NHU2 1237 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 SLC35B2Q8TB61 432 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 DENND1AQ8TEH3 1009 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 COG1Q8WTW3 980 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 MARVELD3Q96A59 401 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 SLC22A18Q96BI1 424 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 ZNF778Q96MU6 729 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 SLX1AQ9BQ83 275 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 SELENOSQ9BQE4 189 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 TMEM121Q9BTD3 319 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 LACRTQ9GZZ8 138 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 SEMA3GQ9NS98 782 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 ENTPD4Q9Y227 616 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 REXO2Q9Y3B8 237 aaKnown RBP13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 MAU2Q9Y6X3 613 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 ABCA12Q86UK0 2595 aa13.54□□□□□ -0.24
PRKXP1-201ENST00000561423 TCRBV7S2A1N4TA0A589 114 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 KRT87PA6NCN2 255 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 SOWAHDA6NJG2 315 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 RASGRF2O14827 1237 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 PSMD3O43242 534 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 PRICKLE3O43900 615 aaPredicted RBP13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 NRP2O60462 931 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 STSP08842 583 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 PSMB5P28074 263 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 GRIA1P42261 906 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 NAP1L1P55209 391 aaKnown RBP13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 ACVR1Q04771 509 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 CDH17Q12864 832 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 MFAP5Q13361 173 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 SF1Q15637 639 aaKnown RBP13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 TCTE1Q5JU00 501 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 ISLR2Q6UXK2 745 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 UNC5DQ6UXZ4 953 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 LINC00523Q86TU6 105 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 KRT222Q8N1A0 295 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 DNAAF3Q8N9W5 541 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 TTC29Q8NA56 475 aaPredicted RBP13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 TRIM56Q9BRZ2 755 aaKnown RBP13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 CRB3Q9BUF7 120 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 UNKQ9C0B0 810 aaKnown RBP13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 TSPY26PQ9H489 355 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 ZNF160Q9HCG1 818 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 INTS7Q9NVH2 962 aaKnown RBP13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 POLEQ07864 2286 aa13.53□□□□□ -0.24
PRKXP1-201ENST00000561423 HEATR9A2RTY3 570 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 GOLGA6L9A6NEM1 432 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 BTNL10A8MVZ5 291 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 HNRNPRO43390 633 aaKnown RBP13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 HPP00738 406 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 RPN2P04844 631 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 BDKRB1P46663 353 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 VSX2P58304 361 aaPredicted RBP13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 KLC1Q07866 573 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 CCSMST1Q4G0I0 132 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 WASHC2DQ5SRD0 308 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 FRMPD2BQ6IN97 320 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 RPUSD3Q6P087 351 aaKnown RBP13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 FAM180AQ6UWF9 173 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 NLRP9Q7RTR0 991 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 LDB1Q86U70 411 aaPredicted RBP13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 FJX1Q86VR8 437 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 PRSS58Q8IYP2 241 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 OR4L1Q8NH43 312 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 ASZ1Q8WWH4 475 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 C8orf44Q96CB5 159 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 CALR3Q96L12 384 aaKnown RBP13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 TTC1Q99614 292 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 CARD6Q9BX69 1037 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 OLAHQ9NV23 265 aa13.52□□□□□ -0.25
PRKXP1-201ENST00000561423 STOX2Q9P2F5 926 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms