RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 FIGLAQ6QHK4 219 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 ZNF662Q6ZS27 426 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 TTLL10Q6ZVT0 673 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 PPP1R32Q7Z5V6 425 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 RAD51AP1Q96B01 352 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 KIFC1Q9BW19 673 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 RAB11FIP5Q9BXF6 653 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 LZTFL1Q9NQ48 299 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 ENAMQ9NRM1 1142 aa15.57■□□□□ 0.08
SNX1-213ENST00000561026 TTC7AQ9ULT0 858 aaPredicted RBP15.57■□□□□ 0.08
SNX1-213ENST00000561026 SPTBN1Q01082 2364 aaKnown RBP15.57■□□□□ 0.08
SNX1-213ENST00000561026 A0A1B0GX78 115 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 VAPBO95292 243 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 FKBP9O95302 570 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 C1orf105O95561 183 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 ITGAXP20702 1163 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 VARSP26640 1264 aaKnown RBP15.56■□□□□ 0.08
SNX1-213ENST00000561026 KCNJ1P48048 391 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 CDK16Q00536 496 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 MYBPC3Q14896 1274 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 PRR30Q53SZ7 412 aaPredicted RBP15.56■□□□□ 0.08
SNX1-213ENST00000561026 TMEM151BQ8IW70 566 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 GALNT16Q8N428 558 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 SKA2Q8WVK7 121 aaPredicted RBP15.56■□□□□ 0.08
SNX1-213ENST00000561026 MAIP1Q8WWC4 291 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 ZUFSPQ96AP4 578 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 NACC2Q96BF6 587 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 MFSD3Q96ES6 412 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 BIRC8Q96P09 236 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 MRM3Q9HC36 420 aaKnown RBP15.56■□□□□ 0.08
SNX1-213ENST00000561026 MRFAP1Q9Y605 127 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 NFS1Q9Y697 457 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 CCDC88CQ9P219 2028 aa15.56■□□□□ 0.08
SNX1-213ENST00000561026 UTP20O75691 2785 aaKnown RBP15.55■□□□□ 0.08
SNX1-213ENST00000561026 SHANK1Q9Y566 2161 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 BLACEA4D250 179 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 TARM1B6A8C7 271 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 ALBP02768 609 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 ALPPP05187 535 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 PIM1P11309 404 aaPredicted RBP15.55■□□□□ 0.08
SNX1-213ENST00000561026 MGAT1P26572 445 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 EIF3BP55884 814 aaKnown RBP15.55■□□□□ 0.08
SNX1-213ENST00000561026 SOX8P57073 446 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 GRM7Q14831 915 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 CCSMST1Q4G0I0 132 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 TCTE1Q5JU00 501 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 CTSL3PQ5NE16 218 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 FHL5Q5TD97 284 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 YOD1Q5VVQ6 348 aaPredicted RBP15.55■□□□□ 0.08
SNX1-213ENST00000561026 MRNIPQ6NTE8 343 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 LRRC8BQ6P9F7 803 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 CES3Q6UWW8 571 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 IGFL3Q6UXB1 125 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 OVCH1Q7RTY7 1134 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 SDCCAG8Q86SQ7 713 aaPredicted RBP15.55■□□□□ 0.08
SNX1-213ENST00000561026 HMGCLL1Q8TB92 370 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 FKBP10Q96AY3 582 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 ZNF285Q96NJ3 590 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 ZNF552Q9H707 407 aaPredicted RBP15.55■□□□□ 0.08
SNX1-213ENST00000561026 HOMER3Q9NSC5 361 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 CUTCQ9NTM9 273 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 SYBUQ9NX95 663 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 RUVBL2Q9Y230 463 aaKnown RBP15.55■□□□□ 0.08
SNX1-213ENST00000561026 ANKRD12Q6UB98 2062 aa15.55■□□□□ 0.08
SNX1-213ENST00000561026 TCP11X1B4DZS4 312 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 AGPSO00116 658 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 MASP2O00187 686 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 DSCR3O14972 297 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 CEP104O60308 925 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 KLHL41O60662 606 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 CTSVO60911 334 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 AGFG2O95081 481 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 CCDC175P0C221 793 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 TPSB2P20231 275 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 MMP11P24347 488 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 MCM3P25205 808 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 CCNFP41002 786 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 BDKRB1P46663 353 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 TPSAB1Q15661 275 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 CYP2A13Q16696 494 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 KCTD19Q17RG1 926 aaPredicted RBP15.54■□□□□ 0.08
SNX1-213ENST00000561026 TYSND1Q2T9J0 566 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 PLEKHN1Q494U1 663 aaPredicted RBP15.54■□□□□ 0.08
SNX1-213ENST00000561026 RAB42Q8N4Z0 105 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 OTUD6BQ8N6M0 293 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 MAGEC3Q8TD91 643 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 LPGAT1Q92604 370 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 FOPNLQ96NB1 174 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 TCF12Q99081 682 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 SELENOSQ9BQE4 189 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 WDR54Q9H977 334 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 LRRC4CQ9HCJ2 640 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 ATP13A2Q9NQ11 1180 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 SOX13Q9UN79 622 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 B3GNT3Q9Y2A9 372 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 KLK4Q9Y5K2 254 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 ESPL1Q14674 2120 aa15.54■□□□□ 0.08
SNX1-213ENST00000561026 TCRBV7S3A2A0A539 114 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 FITM1A5D6W6 292 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 KRT87PA6NCN2 255 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms