RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ABCG8Q9H221 673 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 IPPKQ9H8X2 491 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 TM9SF3Q9HD45 589 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 MKLN1Q9UL63 735 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 LYVE1Q9Y5Y7 322 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 MUSKO15146 869 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 RGS5O15539 181 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 FKBP9O95302 570 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 ENDOUP21128 410 aaKnown RBP16.09■□□□□ 0.17
TPM1-228ENST00000560975 LHX1P48742 406 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 IL2P60568 153 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 DAB2P98082 770 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 VLDLRP98155 873 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 NPRL3Q12980 569 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 ARMCX4Q5H9R4 360 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 TWF2Q6IBS0 349 aaKnown RBP16.09■□□□□ 0.17
TPM1-228ENST00000560975 TAPT1Q6NXT6 567 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 TRNT1Q96Q11 434 aaKnown RBP16.09■□□□□ 0.17
TPM1-228ENST00000560975 SIGLEC11Q96RL6 698 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 TTPALQ9BTX7 342 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 PDGFDQ9GZP0 370 aaPredicted RBP16.09■□□□□ 0.17
TPM1-228ENST00000560975 MMP28Q9H239 520 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 RUBCNLQ9H714 662 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 RANGRFQ9HD47 186 aaPredicted RBP16.09■□□□□ 0.17
TPM1-228ENST00000560975 TMLHEQ9NVH6 421 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 GPR83Q9NYM4 423 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 TAS2R16Q9NYV7 291 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 RBPJLQ9UBG7 517 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 ERVW-1Q9UQF0 538 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 PTCH2Q9Y6C5 1203 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 GOLGA8CPA6NN73 597 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 VPS26AO75436 327 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 STSP08842 583 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 DNAJA1P31689 397 aaKnown RBP16.09■□□□□ 0.17
TPM1-228ENST00000560975 UGT2B15P54855 530 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 P2RX3P56373 397 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 GTF2H2Q13888 395 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 STARD3Q14849 445 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 TYSND1Q2T9J0 566 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 WDR45BQ5MNZ6 344 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 GTF2H2CQ6P1K8 395 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 SUSD1Q6UWL2 747 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 RAB43Q86YS6 212 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 BRSK1Q8TDC3 778 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 JPH3Q8WXH2 748 aaPredicted RBP16.09■□□□□ 0.17
TPM1-228ENST00000560975 GABARAPL1Q9H0R8 117 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 TMEM45AQ9NWC5 275 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 NPAP1Q9NZP6 1156 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 DNAH12Q6ZR08 3092 aa16.08■□□□□ 0.17
TPM1-228ENST00000560975 PNMA8CA0A1B0GUJ8 204 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 FAM220BPB1ANY3 271 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 SLC25A27O95847 323 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 HSPA7P48741 367 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 ELP6Q0PNE2 266 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 SLC14A1Q13336 389 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 GPR50Q13585 617 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 ZMAT1Q5H9K5 638 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 ARMC4Q5T2S8 1044 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 MSANTD2Q6P1R3 559 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 SIMC1Q8NDZ2 872 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 PPP3R2Q96LZ3 170 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 OR2A14Q96R47 310 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 ARPC5LQ9BPX5 153 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 PAAF1Q9BRP4 392 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 ACTL7AQ9Y615 435 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 CASTOR2A6NHX0 329 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 CAPN5O15484 640 aaPredicted RBP16.08■□□□□ 0.16
TPM1-228ENST00000560975 TLR5O60602 858 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 PTHP01270 115 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 FPR1P21462 350 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 CDKN2CP42773 168 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 GDF5P43026 501 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 GPLD1P80108 840 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 XKR4Q5GH76 650 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 RGMBQ6NW40 437 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 PIANPQ8IYJ0 282 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 SLC38A6Q8IZM9 456 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 TP53I13Q8NBR0 393 aaPredicted RBP16.08■□□□□ 0.16
TPM1-228ENST00000560975 OR52E4Q8NGH9 312 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 FCGR1BQ92637 280 aa16.08■□□□□ 0.16
TPM1-228ENST00000560975 CCDC59Q9P031 241 aaKnown RBP16.08■□□□□ 0.16
TPM1-228ENST00000560975 ADM5C9JUS6 153 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 E5RI56 91 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 KIAA0513O60268 411 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 DDOSTP39656 456 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 MLLT6P55198 1093 aaPredicted RBP16.07■□□□□ 0.16
TPM1-228ENST00000560975 EIF4EBP2Q13542 120 aaPredicted RBP16.07■□□□□ 0.16
TPM1-228ENST00000560975 CAMK2GQ13555 558 aaPredicted RBP16.07■□□□□ 0.16
TPM1-228ENST00000560975 TRIM60Q495X7 471 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 ATG9BQ674R7 924 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 PSAPL1Q6NUJ1 521 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 DOK6Q6PKX4 331 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 ZNF551Q7Z340 670 aaPredicted RBP16.07■□□□□ 0.16
TPM1-228ENST00000560975 TRPM4Q8TD43 1214 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 HCAR2Q8TDS4 363 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 GGHQ92820 318 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 CPPED1Q9BRF8 314 aaPredicted RBP16.07■□□□□ 0.16
TPM1-228ENST00000560975 SLC30A2Q9BRI3 323 aa16.07■□□□□ 0.16
TPM1-228ENST00000560975 NUFIP1Q9UHK0 495 aaKnown RBP16.07■□□□□ 0.16
TPM1-228ENST00000560975 PCDHGA6Q9Y5G7 932 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms