RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.73■□□□□ 0.43
TPM1-226ENST00000560959 ZUFSPQ96AP4 578 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 CRB3Q9BUF7 120 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 RNF32Q9H0A6 362 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 ZNF160Q9HCG1 818 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 NLE1Q9NVX2 485 aaPredicted RBP17.73■□□□□ 0.43
TPM1-226ENST00000560959 SEC14L3Q9UDX4 400 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 NF1P21359 2839 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 TARM1B6A8C7 271 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 MAP2K7O14733 419 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 AKR1B10O60218 316 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 UNC5CO95185 931 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 RASAL1O95294 804 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 SERPINA7P05543 415 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 ZGLP1P0C6A0 271 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 PRR35P0CG20 571 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 PKLRP30613 574 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 OR1D4P47884 311 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 CASP6P55212 293 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 OCA2Q04671 838 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 KLC1Q07866 573 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 OLIG2Q13516 323 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 DBN1Q16643 649 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 ANKRD20A2Q5SQ80 823 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 ANKRD20A1Q5TYW2 823 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 ANKRD20A3Q5VUR7 823 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 PRMT9Q6P2P2 845 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 RIPOR1Q6ZS17 1223 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 FAM20CQ8IXL6 584 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 KLHDC8BQ8IXV7 354 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 PIANPQ8IYJ0 282 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 OR8K1Q8NGG5 319 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 STT3BQ8TCJ2 826 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 ELMO1Q92556 727 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 MIEF2Q96C03 454 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 LRRC45Q96CN5 670 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 C14orf79Q96F83 325 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 CDKN2AIPNLQ96HQ2 116 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 DNAJC1Q96KC8 554 aaKnown RBP17.72■□□□□ 0.43
TPM1-226ENST00000560959 MENTQ9BUN1 341 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 ZNF304Q9HCX3 659 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 SMARCAL1Q9NZC9 954 aa17.72■□□□□ 0.43
TPM1-226ENST00000560959 ZNF282Q9UDV7 671 aaPredicted RBP17.72■□□□□ 0.43
TPM1-226ENST00000560959 IGLV3-12A0A075B6K2 115 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 NSG1A0A0A6YYJ2 146 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 H7C0C1 242 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 APOC4-APOC2K7ER74 178 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 CCL22O00626 93 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 KCNN4O15554 427 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 BMP10O95393 424 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 APOC2P02655 101 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 SNRPB2P08579 225 aaKnown RBP17.71■□□□□ 0.43
TPM1-226ENST00000560959 CD9P21926 228 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 PSMA3P25788 255 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 PSMB4P28070 264 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 ATP5OP48047 213 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 FIGLAQ6QHK4 219 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 BBS12Q6ZW61 710 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 KATNAL2Q8IYT4 538 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 LINC01555Q8NAE3 123 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 STYXQ8WUJ0 223 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 HAUS1Q96CS2 278 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 DNAJC7Q99615 494 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 TBL1YQ9BQ87 522 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 SELENOSQ9BQE4 189 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 PLA2G3Q9NZ20 509 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.71■□□□□ 0.43
TPM1-226ENST00000560959 PTGFRNQ9P2B2 879 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 C3orf18Q9UK00 162 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 INTUQ9ULD6 942 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 PLAGL1Q9UM63 463 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 KLHL20Q9Y2M5 609 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 HYOU1Q9Y4L1 999 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 KLK4Q9Y5K2 254 aa17.71■□□□□ 0.43
TPM1-226ENST00000560959 F8W8V4 182 aa17.7■□□□□ 0.42
TPM1-226ENST00000560959 RPN2P04844 631 aa17.7■□□□□ 0.42
TPM1-226ENST00000560959 OR56A5P0C7T3 313 aa17.7■□□□□ 0.42
TPM1-226ENST00000560959 MCM3P25205 808 aa17.7■□□□□ 0.42
TPM1-226ENST00000560959 MST1P26927 711 aa17.7■□□□□ 0.42
TPM1-226ENST00000560959 SMSP52788 366 aa17.7■□□□□ 0.42
TPM1-226ENST00000560959 AP2B1P63010 937 aa17.7■□□□□ 0.42
TPM1-226ENST00000560959 BRD3Q15059 726 aa17.7■□□□□ 0.42
TPM1-226ENST00000560959 BRIX1Q8TDN6 353 aaKnown RBP17.7■□□□□ 0.42
TPM1-226ENST00000560959 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.7■□□□□ 0.42
TPM1-226ENST00000560959 ALG6Q9Y672 507 aa17.7■□□□□ 0.42
TPM1-226ENST00000560959 PRSS21Q9Y6M0 314 aa17.7■□□□□ 0.42
TPM1-226ENST00000560959 HYKKA2RU49 373 aa17.69■□□□□ 0.42
TPM1-226ENST00000560959 STK10O94804 968 aaKnown RBP17.69■□□□□ 0.42
TPM1-226ENST00000560959 PRSS56P0CW18 603 aa17.69■□□□□ 0.42
TPM1-226ENST00000560959 COX6A1P12074 109 aa17.69■□□□□ 0.42
TPM1-226ENST00000560959 GRIA3P42263 894 aa17.69■□□□□ 0.42
TPM1-226ENST00000560959 SYTL3Q4VX76 610 aa17.69■□□□□ 0.42
TPM1-226ENST00000560959 OR2L8Q8NGY9 312 aa17.69■□□□□ 0.42
TPM1-226ENST00000560959 SUN3Q8TAQ9 357 aa17.69■□□□□ 0.42
TPM1-226ENST00000560959 SPOCK3Q9BQ16 436 aa17.69■□□□□ 0.42
TPM1-226ENST00000560959 ZNHIT6Q9NWK9 470 aaKnown RBP17.69■□□□□ 0.42
TPM1-226ENST00000560959 EFR3BQ9Y2G0 817 aa17.69■□□□□ 0.42
TPM1-226ENST00000560959 MAU2Q9Y6X3 613 aa17.69■□□□□ 0.42
TPM1-226ENST00000560959 MED13LQ71F56 2210 aa17.69■□□□□ 0.42
TPM1-226ENST00000560959 PRICKLE3O43900 615 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms