RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 PRR20EP86478 221 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 PRR20CP86479 221 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 PRR20DP86480 221 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 PRR20BP86481 221 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 PRR20AP86496 221 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 ROR2Q01974 943 aaKnown RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 SRSF11Q05519 484 aaKnown RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 CHRNB3Q05901 458 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 CYP4F3Q08477 520 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 ABHD18Q0P651 414 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 MERTKQ12866 999 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 MTAPQ13126 283 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 DYNC1I2Q13409 638 aaKnown RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 BIRC2Q13490 618 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 FRG2Q64ET8 278 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 AMIGO2Q86SJ2 522 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 CALHM3Q86XJ0 350 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 EID3Q8N140 333 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 PGBD3Q8N328 593 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 TMEM132CQ8N3T6 1108 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 SVOPLQ8N434 492 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 FAM160A2Q8N612 972 aaPredicted RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 BEND7Q8N7W2 519 aaPredicted RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 ZNF548Q8NEK5 533 aaPredicted RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 TMIEQ8NEW7 156 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 OR2T12Q8NG77 320 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 ADAMTS16Q8TE57 1224 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 ELMO1Q92556 727 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 GLYATL1Q969I3 302 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 TBC1D20Q96BZ9 403 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 TCEAL4Q96EI5 215 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 RMND5BQ96G75 393 aaPredicted RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 FOPNLQ96NB1 174 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 ZNF583Q96ND8 569 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 FRG2BQ96QU4 278 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 SLC29A1Q99808 456 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 CCM2Q9BSQ5 444 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 ACPTQ9BZG2 426 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 SEMA6AQ9H2E6 1030 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 RPF2Q9H7B2 306 aaKnown RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 CLK4Q9HAZ1 481 aaKnown RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 PAPOLBQ9NRJ5 636 aaKnown RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 HCFC1R1Q9NWW0 138 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 OBP2AQ9NY56 170 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 PRKAG2Q9UGJ0 569 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 DMTF1Q9Y222 760 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 RUVBL1Q9Y265 456 aaKnown RBP9.45□□□□□ -0.9
RTF1-206ENST00000560447 GMEB1Q9Y692 573 aa9.45□□□□□ -0.9
RTF1-206ENST00000560447 RNF103-CHMP3A0A140T963 221 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 SLC5A10A0PJK1 596 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 ELOVL7A1L3X0 281 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 C9JVG2 144 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 H0YIV9 168 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 SOCS2O14508 198 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 FFAR3O14843 346 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 CLGNO14967 610 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 ACOX3O15254 700 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 CLOCKO15516 846 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 GPR42O15529 346 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 BNIP3LO60238 219 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 RECQL5O94762 991 aaPredicted RBP9.44□□□□□ -0.9
RTF1-206ENST00000560447 BMP10O95393 424 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 NFATC1O95644 943 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 PDYNP01213 254 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 TFAP2AP05549 437 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 ADH5P11766 374 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 HOXB9P17482 250 aaPredicted RBP9.44□□□□□ -0.9
RTF1-206ENST00000560447 SYN1P17600 705 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 PPIBP23284 216 aaKnown RBP9.44□□□□□ -0.9
RTF1-206ENST00000560447 ITGB7P26010 798 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 TTKP33981 857 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 GDF5P43026 501 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 ASMTP46597 345 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 OR4D2P58180 307 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 HSPA14Q0VDF9 509 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 DHCR24Q15392 516 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 NRF1Q16656 503 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 CNPY1Q3B7I2 92 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 PTCHD3Q3KNS1 767 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 PLA2G4EQ3MJ16 856 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 FAM174BQ3ZCQ3 159 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 SLC36A3Q495N2 470 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 SYTL3Q4VX76 610 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 TMEM240Q5SV17 173 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 GRHL2Q6ISB3 625 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 ERICH5Q6P6B1 374 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 BRICD5Q6PL45 260 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 LIPIQ6XZB0 460 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 HSD11B1LQ7Z5J1 315 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 IFNEQ86WN2 208 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 EPHX4Q8IUS5 362 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 MICU2Q8IYU8 434 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 SLC22A15Q8IZD6 547 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 CBR4Q8N4T8 237 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 DHRSXQ8N5I4 330 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 DCBLD1Q8N8Z6 715 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 PHC3Q8NDX5 983 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 ITFG1Q8TB96 612 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 PNPT1Q8TCS8 783 aaKnown RBP9.44□□□□□ -0.9
RTF1-206ENST00000560447 NAT14Q8WUY8 206 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms