RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 FOXJ1Q92949 421 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 OR2M4Q96R27 311 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 COQ7Q99807 217 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 FBRSQ9HAH7 460 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 IL21Q9HBE4 155 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 A8MU76 341 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 SLC35G6P0C7Q6 338 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 JUNDP17535 347 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 ATP6V1E1P36543 226 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 VAC14Q08AM6 782 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 LSAMPQ13449 338 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 TCTN1Q2MV58 587 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 CCNYL2Q5T2Q4 361 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 GALNT18Q6P9A2 607 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 GK5Q6ZS86 529 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 ERI1Q8IV48 349 aaKnown RBP10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 C2CD4AQ8NCU7 369 aaPredicted RBP10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 SRFBP1Q8NEF9 429 aaKnown RBP10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 PSMA8Q8TAA3 256 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 DNAJB14Q8TBM8 379 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 HM13Q8TCT9 377 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 LRTOMTQ8WZ04 291 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 KCNJ9Q92806 393 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 TSACCQ96A04 125 aaPredicted RBP10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 ISG20Q96AZ6 181 aaKnown RBP10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 COQ10BQ9H8M1 238 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 MRPS30Q9NP92 439 aaKnown RBP10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 GALPQ9UBC7 116 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 SLC22A14Q9Y267 594 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 ECI2O75521 394 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 S100A1P23297 94 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 IVDP26440 423 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 BDKRB1P46663 353 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 SUOXP51687 545 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 PGGT1BP53609 377 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 TMEM31Q5JXX7 168 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 ZNF781Q8N8C0 355 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 POC5Q8NA72 575 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 WFDC5Q8TCV5 224 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 NCSTNQ92542 709 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 SLC22A18Q96BI1 424 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 ROGDIQ9GZN7 287 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 LRTM1Q9HBL6 345 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 MRM3Q9HC36 420 aaKnown RBP10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 TRIM39Q9HCM9 518 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 SUSD2Q9UGT4 822 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 PCDHGA11Q9Y5H2 935 aa10.4□□□□□ -0.74
CARMIL3-202ENST00000559694 A0A0G2JN53 185 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 CACNG3O60359 315 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 GJB3O75712 270 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 MED26O95402 600 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 PRSS56P0CW18 603 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 HSMCR30P0CW71 290 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 T-ENOLP0DO92 83 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 AP1S2P56377 157 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 PUS10Q3MIT2 529 aaKnown RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 LILRA6Q6PI73 481 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 Q7L0L9 218 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 GKN2Q86XP6 184 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 C10orf53Q8N6V4 93 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 ZBTB8BQ8NAP8 495 aaPredicted RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 TWIST2Q8WVJ9 160 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 PEX13Q92968 403 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 RTP4Q96DX8 246 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 TOE1Q96GM8 510 aaKnown RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 PCBD2Q9H0N5 130 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 SCML1Q9UN30 329 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 SIT1Q9Y3P8 196 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 POLR3HQ9Y535 204 aaPredicted RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 FAM149AA5PLN7 773 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 THEGLP0DJG4 465 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 ZNF12P17014 697 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 MRPS21P82921 87 aaKnown RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 SQLEQ14534 574 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 ARMC4Q5T2S8 1044 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 TRIM40Q6P9F5 258 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 PARS2Q7L3T8 475 aaKnown RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 SPRED2Q7Z698 418 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 CBR4Q8N4T8 237 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 Q8N9G6 341 aaPredicted RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 MAFAQ8NHW3 353 aaPredicted RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 BTN2A2Q8WVV5 523 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 ZNF556Q9HAH1 456 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 IL17CQ9P0M4 197 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 SOBPA7XYQ1 873 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 AURKAO14965 403 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 LATO43561 262 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 ZDHHC11BP0C7U3 371 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 ST13P50502 369 aaKnown RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 ZNF846Q147U1 533 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 NDUFA9Q16795 377 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 PTCHD3Q3KNS1 767 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 CMPK2Q5EBM0 449 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 TTC23Q5W5X9 447 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 SMPDL3AQ92484 453 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 PRR11Q96HE9 360 aaPredicted RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 CDK15Q96Q40 435 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 RAB11FIP5Q9BXF6 653 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 IL26Q9NPH9 171 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 IMPAD1Q9NX62 359 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms