RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 HSD17B2P37059 387 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 CSRP3P50461 194 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 HSD11B2P80365 405 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 TAP2Q03519 686 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 NAA30Q147X3 362 aaPredicted RBP19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 TBC1D25Q3MII6 688 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 SUSD1Q6UWL2 747 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 SBSNQ6UWP8 590 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 MBOAT1Q6ZNC8 495 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 CLEC14AQ86T13 490 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 LRRC56Q8IYG6 542 aaPredicted RBP19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 PPFIBP2Q8ND30 876 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 OR2A1Q8NGT9 310 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 SLC22A18Q96BI1 424 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 CCDC138Q96M89 665 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 ZNF578Q96N58 590 aaPredicted RBP19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 CNTNAP3BQ96NU0 1288 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 DHRS4Q9BTZ2 278 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 PARD6BQ9BYG5 372 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 CNTNAP3Q9BZ76 1288 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 UNKQ9C0B0 810 aaKnown RBP19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 DERL2Q9GZP9 239 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 APMAPQ9HDC9 416 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 BTRCQ9Y297 605 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 IKBKGQ9Y6K9 419 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 A0A0J9YY10 115 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 EXOC1LA0A1B0GW35 172 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 NPEPPSL1A6NEC2 478 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 TAF4O00268 1085 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 NVLO15381 856 aaKnown RBP19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 TLX3O43711 291 aaPredicted RBP19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 EBLN1P0CF75 366 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 PSMB5P28074 263 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 IMPA1P29218 277 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 CRABP2P29373 138 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 ARL4DP49703 201 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 SERPINB9P50453 376 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 ERVPABLB-1P60509 514 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 DLG1Q12959 904 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 SF1Q15637 639 aaKnown RBP19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 ZIC1Q15915 447 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 RAPH1Q70E73 1250 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 KDF1Q8NAX2 398 aaPredicted RBP19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 SMPDL3AQ92484 453 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 OR6C1Q96RD1 312 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 CTRCQ99895 268 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 STOX2Q9P2F5 926 aaPredicted RBP19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 CTNNAL1Q9UBT7 734 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 ZNF180Q9UJW8 692 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 NOVA2Q9UNW9 492 aaKnown RBP19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 KLHL20Q9Y2M5 609 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 PCDHGA7Q9Y5G6 932 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 PCDHGA3Q9Y5H0 932 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 B3GALT1Q9Y5Z6 326 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 SEC16AO15027 2179 aa19.56■□□□□ 0.72
TSPAN3-207ENST00000559494 HEATR5BQ9P2D3 2071 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 ALDOAP04075 364 aaKnown RBP19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 C2P06681 752 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 HIST1H2AGP0C0S8 130 aaPredicted RBP19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 CD1DP15813 335 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 HIST1H2ADP20671 130 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 YBX1P67809 324 aaKnown RBP19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 FOXM1Q08050 763 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 CSHL1Q14406 222 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 TSNQ15631 228 aaKnown RBP19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 PPP1R3AQ16821 1122 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 ZXDCQ2QGD7 858 aaPredicted RBP19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 KIAA1614Q5VZ46 1190 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 ADGRD1Q6QNK2 874 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 SYTL1Q8IYJ3 562 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 AENQ8WTP8 325 aaKnown RBP19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 UBLCP1Q8WVY7 318 aaPredicted RBP19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 FGF11Q92914 225 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 HIST1H2AHQ96KK5 128 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 HIST1H2AJQ99878 128 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 H2AFJQ9BTM1 129 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 DDA1Q9BW61 102 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 TRIM54Q9BYV2 358 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 B3GNT4Q9C0J1 378 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 FAM60AQ9NP50 221 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 SNX15Q9NRS6 342 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 THSD1Q9NS62 852 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 SOHLH2Q9NX45 425 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 FOXJ2Q9P0K8 574 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 ADAMTS20P59510 1910 aa19.55■□□□□ 0.72
TSPAN3-207ENST00000559494 ZNF839A8K0R7 811 aa19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 POLR1CO15160 346 aaPredicted RBP19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 ENO2P09104 434 aaPredicted RBP19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 AP1S2P56377 157 aa19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 RAB15P59190 212 aa19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 DCAF12Q5T6F0 453 aa19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 AGTRAPQ6RW13 159 aa19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 C19orf47Q8N9M1 422 aaKnown RBP19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 ZCCHC14Q8WYQ9 949 aaKnown RBP19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 MIPEPQ99797 713 aa19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 ACAT2Q9BWD1 397 aa19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 ATG10Q9H0Y0 220 aa19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 PDE7BQ9NP56 450 aa19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 ARL15Q9NXU5 204 aa19.54■□□□□ 0.72
TSPAN3-207ENST00000559494 UTP6Q9NYH9 597 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms