RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 FURINP09958 794 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 ERVK-10P10266 1014 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 IVDP26440 423 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 RORAP35398 523 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 CUL1Q13616 776 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 SF1Q15637 639 aaKnown RBP12.12□□□□□ -0.47
LRRC28-214ENST00000559433 KLHL38Q2WGJ6 581 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 PTCHD3Q3KNS1 767 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 SPANXN3Q5MJ09 141 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 LCN10Q6JVE6 187 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 ZNF549Q6P9A3 640 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 SYTL1Q8IYJ3 562 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 PDIK1LQ8N165 341 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 DNAJC22Q8N4W6 341 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 GIMAP7Q8NHV1 300 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 C9orf43Q8TAL5 461 aaPredicted RBP12.12□□□□□ -0.47
LRRC28-214ENST00000559433 KCNJ9Q92806 393 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 SLC30A3Q99726 388 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 NAT9Q9BTE0 207 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 TRIM31Q9BZY9 425 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 FAM114A2Q9NRY5 505 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 INTS7Q9NVH2 962 aaKnown RBP12.12□□□□□ -0.47
LRRC28-214ENST00000559433 SPATA7Q9P0W8 599 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 RNF14Q9UBS8 474 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 PLCL2Q9UPR0 1127 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 MAN2B2Q9Y2E5 1009 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 COMMD10Q9Y6G5 202 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 SPTA1P02549 2419 aa12.12□□□□□ -0.47
LRRC28-214ENST00000559433 HELZ2Q9BYK8 2649 aaKnown RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 ARHGEF33A8MVX0 844 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 ZSCAN9O15535 394 aaPredicted RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 PSIP1O75475 530 aaKnown RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 HAUS5O94927 633 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 CATP04040 527 aaKnown RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 PSMB5P28074 263 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 GABRA4P48169 554 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 ITGA8P53708 1063 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 UGT8Q16880 541 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 HP1BP3Q5SSJ5 553 aaPredicted RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 HIBCHQ6NVY1 386 aaPredicted RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 FIGLAQ6QHK4 219 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 ZNF517Q6ZMY9 492 aaPredicted RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 NEK10Q6ZWH5 1172 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 SYVN1Q86TM6 617 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 PTRH1Q86Y79 214 aaKnown RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 IGDCC3Q8IVU1 814 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 C17orf53Q8N3J3 647 aaPredicted RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 ENDOVQ8N8Q3 282 aaKnown RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 OR9A1PQ8NGU1 263 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 DENND1AQ8TEH3 1009 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 THAP4Q8WY91 577 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 CFAP36Q96G28 342 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 SNF8Q96H20 258 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 PWWP2AQ96N64 755 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 KRT12Q99456 494 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 GPR21Q99679 349 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 C17orf62Q9BQA9 187 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 DPH2Q9BQC3 489 aaPredicted RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 SPRTNQ9H040 489 aaPredicted RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 PPANQ9NQ55 473 aaKnown RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 ZNF71Q9NQZ8 489 aaPredicted RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 EURLQ9NYK6 297 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 KLHL42Q9P2K6 505 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 GPN3Q9UHW5 284 aaPredicted RBP12.11□□□□□ -0.47
LRRC28-214ENST00000559433 CHMP2BQ9UQN3 213 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 AP1M2Q9Y6Q5 423 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 CCDC88CQ9P219 2028 aa12.11□□□□□ -0.47
LRRC28-214ENST00000559433 C9J4A7 227 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 H3BMH7 237 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 MYO1CO00159 1063 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 SMAPO00193 183 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 VPS26AO75436 327 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 SEC31AO94979 1220 aaKnown RBP12.1□□□□□ -0.47
LRRC28-214ENST00000559433 FKBP9O95302 570 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 CTSBP07858 339 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 RAB40ALP0C0E4 278 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 ELK3P41970 407 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 ARL4CP56559 192 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 KCNC4Q03721 635 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 IL10RAQ13651 578 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 HIF1AQ16665 826 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 CYP2A13Q16696 494 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 C1orf189Q5VU69 101 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 FCRL6Q6DN72 434 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 TLDC1Q6P9B6 456 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 FAM198BQ6UWH4 519 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 SPNS2Q8IVW8 549 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 ZNF655Q8N720 491 aaPredicted RBP12.1□□□□□ -0.47
LRRC28-214ENST00000559433 C2CD4AQ8NCU7 369 aaPredicted RBP12.1□□□□□ -0.47
LRRC28-214ENST00000559433 HMGCLL1Q8TB92 370 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 CD200R1Q8TD46 325 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 INPP5DQ92835 1189 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 CERS2Q96G23 380 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 NDNQ99608 321 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 MIPEPQ99797 713 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 AARSD1Q9BTE6 412 aaKnown RBP12.1□□□□□ -0.47
LRRC28-214ENST00000559433 NDC1Q9BTX1 674 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 NLNQ9BYT8 704 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 TXLNGQ9NUQ3 528 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms