RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 SLC5A12Q1EHB4 618 aa24.67■■□□□ 1.54
SMAD6-202ENST00000557916 TAF1BQ53T94 588 aaPredicted RBP24.67■■□□□ 1.54
SMAD6-202ENST00000557916 MBOAT1Q6ZNC8 495 aa24.67■■□□□ 1.54
SMAD6-202ENST00000557916 ADAMTSL2Q86TH1 951 aa24.67■■□□□ 1.54
SMAD6-202ENST00000557916 TRIM73Q86UV7 250 aa24.67■■□□□ 1.54
SMAD6-202ENST00000557916 PPFIBP2Q8ND30 876 aa24.67■■□□□ 1.54
SMAD6-202ENST00000557916 GATA6Q92908 595 aa24.67■■□□□ 1.54
SMAD6-202ENST00000557916 UTP6Q9NYH9 597 aaKnown RBP24.67■■□□□ 1.54
SMAD6-202ENST00000557916 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.67■■□□□ 1.54
SMAD6-202ENST00000557916 STOX2Q9P2F5 926 aaPredicted RBP24.67■■□□□ 1.54
SMAD6-202ENST00000557916 PSMC3IPQ9P2W1 217 aaPredicted RBP24.67■■□□□ 1.54
SMAD6-202ENST00000557916 A0A096LPK6 155 aa24.66■■□□□ 1.54
SMAD6-202ENST00000557916 E7ENX8 843 aa24.66■■□□□ 1.54
SMAD6-202ENST00000557916 PRICKLE3O43900 615 aaPredicted RBP24.66■■□□□ 1.54
SMAD6-202ENST00000557916 TNFSF15O95150 251 aa24.66■■□□□ 1.54
SMAD6-202ENST00000557916 FGF3P11487 239 aaPredicted RBP24.66■■□□□ 1.54
SMAD6-202ENST00000557916 ST6GAL1P15907 406 aa24.66■■□□□ 1.54
SMAD6-202ENST00000557916 OAS2P29728 719 aaKnown RBP24.66■■□□□ 1.54
SMAD6-202ENST00000557916 HSD11B2P80365 405 aa24.66■■□□□ 1.54
SMAD6-202ENST00000557916 TAP2Q03519 686 aa24.66■■□□□ 1.54
SMAD6-202ENST00000557916 TSTA3Q13630 321 aaPredicted RBP24.66■■□□□ 1.54
SMAD6-202ENST00000557916 SF1Q15637 639 aaKnown RBP24.66■■□□□ 1.54
SMAD6-202ENST00000557916 SUSD1Q6UWL2 747 aa24.66■■□□□ 1.54
SMAD6-202ENST00000557916 LSMEM2Q8N112 164 aa24.66■■□□□ 1.54
SMAD6-202ENST00000557916 ISL2Q96A47 359 aa24.66■■□□□ 1.54
SMAD6-202ENST00000557916 TRAPPC9Q96Q05 1148 aa24.66■■□□□ 1.54
SMAD6-202ENST00000557916 KLHL25Q9H0H3 589 aa24.66■■□□□ 1.54
SMAD6-202ENST00000557916 A0A0J9YY10 115 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 A0A1W2PPV9 198 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 B4E171 279 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 GUCA1CO95843 209 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 LTA4HP09960 611 aaKnown RBP24.65■■□□□ 1.54
SMAD6-202ENST00000557916 PVRP15151 417 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 RBMS1P29558 406 aaKnown RBP24.65■■□□□ 1.54
SMAD6-202ENST00000557916 ETV5P41161 510 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 TSPAN7P41732 249 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 MAGEA12P43365 314 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 MAPK10P53779 464 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 IRF9Q00978 393 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 DLG1Q12959 904 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 FRA10AC1Q70Z53 315 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 MTBPQ96DY7 904 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 SLC46A1Q96NT5 459 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 VPS11Q9H270 941 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 NMRAL1Q9HBL8 299 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 IGSF5Q9NSI5 407 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 SOHLH2Q9NX45 425 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 OARD1Q9Y530 152 aa24.65■■□□□ 1.54
SMAD6-202ENST00000557916 IQANK1A0A1B0GTG1 560 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 BRINP1O60477 761 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 PSMB5P28074 263 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 RPA3P35244 121 aaPredicted RBP24.64■■□□□ 1.54
SMAD6-202ENST00000557916 SH3BP2P78314 561 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 CYP4F3Q08477 520 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 AGTRAPQ6RW13 159 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 IGF2-ASQ6U949 168 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 FAM20CQ8IXL6 584 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 LRRC56Q8IYG6 542 aaPredicted RBP24.64■■□□□ 1.54
SMAD6-202ENST00000557916 BMPERQ8N8U9 685 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 KCTD4Q8WVF5 259 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 NXNL1Q96CM4 212 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 TMEM121BQ9BXQ6 578 aaPredicted RBP24.64■■□□□ 1.54
SMAD6-202ENST00000557916 PPCSQ9HAB8 311 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 SIDT1Q9NXL6 827 aaKnown RBP24.64■■□□□ 1.54
SMAD6-202ENST00000557916 BTRCQ9Y297 605 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 PCDHB11Q9Y5F2 797 aa24.64■■□□□ 1.54
SMAD6-202ENST00000557916 MAP3K7O43318 606 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 MC2RQ01718 297 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 KCNAB1Q14722 419 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 FAM83EQ2M2I3 478 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 CENPLQ8N0S6 344 aaPredicted RBP24.63■■□□□ 1.53
SMAD6-202ENST00000557916 D2HGDHQ8N465 521 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 MREGQ8N565 214 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 OR2A1Q8NGT9 310 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 ATL1Q8WXF7 558 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 KIAA1191Q96A73 305 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 PTERQ96BW5 349 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 ACAT2Q9BWD1 397 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 ATG10Q9H0Y0 220 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 ABCF3Q9NUQ8 709 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 SLC39A1Q9NY26 324 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 TBK1Q9UHD2 729 aa24.63■■□□□ 1.53
SMAD6-202ENST00000557916 DXOO77932 396 aaKnown RBP24.62■■□□□ 1.53
SMAD6-202ENST00000557916 FKBP9O95302 570 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 NUDT17P0C025 328 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 TFEBP19484 476 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 MLLT3P42568 568 aaPredicted RBP24.62■■□□□ 1.53
SMAD6-202ENST00000557916 SLCO1A2P46721 670 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 CDKL1Q00532 357 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 FOXM1Q08050 763 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 OR4D1Q15615 310 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 TMTC4Q5T4D3 741 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 TIFABQ6ZNK6 161 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 GPSM1Q86YR5 675 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 CNPY4Q8N129 248 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 USP7Q93009 1102 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 FBXL8Q96CD0 374 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 TAAR9Q96RI9 348 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 MIPEPQ99797 713 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 EGFL8Q99944 293 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms