RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 F7P08709 466 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-234ENST00000557703 ANXA5P08758 320 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 LTA4HP09960 611 aaKnown RBP13.22□□□□□ -0.29
SHMT2-234ENST00000557703 SLC35E2BP0CK96 405 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 UGT2B7P16662 529 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 MAGEA12P43365 314 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 GABREP78334 506 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 TAP2Q03519 686 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 C16orf72Q14CZ0 275 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 ACAP2Q15057 778 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 SF1Q15637 639 aaKnown RBP13.22□□□□□ -0.29
SHMT2-234ENST00000557703 UAP1Q16222 522 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-234ENST00000557703 TSNAXIP1Q2TAA8 658 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.22□□□□□ -0.29
SHMT2-234ENST00000557703 DCAF12Q5T6F0 453 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 METTL2BQ6P1Q9 378 aaKnown RBP13.22□□□□□ -0.29
SHMT2-234ENST00000557703 SBSNQ6UWP8 590 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 FAM92BQ6ZTR7 304 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 CROCCP2Q86T23 111 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 SYTL1Q8IYJ3 562 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 RIBC1Q8N443 379 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-234ENST00000557703 LINC01555Q8NAE3 123 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 ZNF480Q8WV37 535 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 DCAKDQ8WVC6 231 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 UBLCP1Q8WVY7 318 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-234ENST00000557703 FBXL8Q96CD0 374 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 PKP4Q99569 1192 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 MIPEPQ99797 713 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 HAUS8Q9BT25 410 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 CAPS2Q9BXY5 557 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 FAM117AQ9C073 453 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 EPB41L4BQ9H329 900 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 XKR8Q9H6D3 395 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 CCDC86Q9H6F5 360 aaKnown RBP13.22□□□□□ -0.29
SHMT2-234ENST00000557703 CNOT10Q9H9A5 744 aaKnown RBP13.22□□□□□ -0.29
SHMT2-234ENST00000557703 FANCEQ9HB96 536 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 ENAMQ9NRM1 1142 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 ARL15Q9NXU5 204 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 TMEM9Q9P0T7 183 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 AK5Q9Y6K8 562 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 SEC16AO15027 2179 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 KIF26BQ2KJY2 2108 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 APC2O95996 2303 aa13.22□□□□□ -0.29
SHMT2-234ENST00000557703 ANKRD12Q6UB98 2062 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 IGHV5-51A0A0C4DH38 117 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 HMX2A2RU54 273 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 POC1B-GALNT4F8VUJ3 575 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 POLR1CO15160 346 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 FAM155BO75949 473 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 IPO13O94829 963 aaKnown RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 KLHL2O95198 593 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 TOP3BO95985 862 aaKnown RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 ALDOAP04075 364 aaKnown RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 C2P06681 752 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 CD1DP15813 335 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 CMPK1P30085 196 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 RPA3P35244 121 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 BDKRB1P46663 353 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 PRDX1Q06830 199 aaKnown RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 EFTUD2Q15029 972 aaKnown RBP eCLIP13.21□□□□□ -0.298e-9■■■■■ 30.8
SHMT2-234ENST00000557703 PPP1R3AQ16821 1122 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 TBC1D25Q3MII6 688 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 ZC3H12BQ5HYM0 836 aaKnown RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 C3orf38Q5JPI3 329 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 SNAP47Q5SQN1 464 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 CAPN13Q6MZZ7 669 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 BMPERQ8N8U9 685 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 RCBTB1Q8NDN9 531 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 OR2A1Q8NGT9 310 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 FLVCR1-AS1Q8TAF5 88 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 DENND1AQ8TEH3 1009 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 ANKRD49Q8WVL7 239 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 DLG3Q92796 817 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 PRR11Q96HE9 360 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 TSNARE1Q96NA8 513 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 TRAPPC9Q96Q05 1148 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 CCDC177Q9NQR7 707 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 SNX15Q9NRS6 342 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 SIDT1Q9NXL6 827 aaKnown RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 KLHL3Q9UH77 587 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 TMCO1Q9UM00 188 aa13.21□□□□□ -0.29
SHMT2-234ENST00000557703 RUVBL2Q9Y230 463 aaKnown RBP13.21□□□□□ -0.29
SHMT2-234ENST00000557703 A0A096LPK6 155 aa13.2□□□□□ -0.3
SHMT2-234ENST00000557703 CCDC151A5D8V7 595 aa13.2□□□□□ -0.3
SHMT2-234ENST00000557703 EFCAB7A8K855 629 aa13.2□□□□□ -0.3
SHMT2-234ENST00000557703 A8MU76 341 aa13.2□□□□□ -0.3
SHMT2-234ENST00000557703 PHGDHO43175 533 aaKnown RBP13.2□□□□□ -0.3
SHMT2-234ENST00000557703 SRPX2O60687 465 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-234ENST00000557703 TNFSF15O95150 251 aa13.2□□□□□ -0.3
SHMT2-234ENST00000557703 SYF2O95926 243 aaKnown RBP13.2□□□□□ -0.3
SHMT2-234ENST00000557703 RBP1P09455 135 aa13.2□□□□□ -0.3
SHMT2-234ENST00000557703 FGF3P11487 239 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-234ENST00000557703 FGF5P12034 268 aa13.2□□□□□ -0.3
SHMT2-234ENST00000557703 IMPA1P29218 277 aa13.2□□□□□ -0.3
SHMT2-234ENST00000557703 GGT5P36269 586 aa13.2□□□□□ -0.3
SHMT2-234ENST00000557703 HSD17B3P37058 310 aa13.2□□□□□ -0.3
SHMT2-234ENST00000557703 CSHL1Q14406 222 aa13.2□□□□□ -0.3
SHMT2-234ENST00000557703 SULT1C3Q6IMI6 304 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms