RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ETNK2Q9NVF9 386 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 RMND1Q9NWS8 449 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 ZNF282Q9UDV7 671 aaPredicted RBP8.91□□□□□ -0.98
NEDD1-211ENST00000557454 ACSL5Q9ULC5 683 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 HEBP2Q9Y5Z4 205 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 ABCA1O95477 2261 aa8.91□□□□□ -0.98
NEDD1-211ENST00000557454 PRKDCP78527 4128 aaKnown RBP8.9□□□□□ -0.98
NEDD1-211ENST00000557454 MGAT4DA6NG13 374 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 ANKRD66B4E2M5 251 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 HS6ST1O60243 411 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 MAN1A2O60476 641 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 PRMT3O60678 531 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 DNAJB6O75190 326 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 NEURL1O76050 574 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 PDE9AO76083 593 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 MED26O95402 600 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 HRGP04196 525 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 GLI4P10075 376 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 EPXP11678 715 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 TFEBP19484 476 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 ADH7P40394 386 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 NR0B1P51843 470 aaKnown RBP8.9□□□□□ -0.98
NEDD1-211ENST00000557454 CDH6P55285 790 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 OC90Q02509 493 aaPredicted RBP8.9□□□□□ -0.98
NEDD1-211ENST00000557454 NIPAL4Q0D2K0 466 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 PTP4A2Q12974 167 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 PDLIM3Q53GG5 364 aaPredicted RBP8.9□□□□□ -0.98
NEDD1-211ENST00000557454 CMPK2Q5EBM0 449 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 FNBP1LQ5T0N5 605 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 HIST2H2BDQ6DRA6 164 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 ALG1LQ6GMV1 187 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 DET1Q7L5Y6 550 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 DAAM2Q86T65 1068 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 TEX26Q8N6G2 289 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 MAPK1IP1LQ8NDC0 245 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 OR5M9Q8NGP3 310 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 ARRDC2Q8TBH0 407 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 BRSK1Q8TDC3 778 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 ZNF354BQ96LW1 612 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 MCEEQ96PE7 176 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 PEBP4Q96S96 227 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 NPAS2Q99743 824 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 PIP5K1AQ99755 562 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 TTYH2Q9BSA4 534 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 SNRNP25Q9BV90 132 aaKnown RBP8.9□□□□□ -0.98
NEDD1-211ENST00000557454 VPS16Q9H269 839 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 TFB2MQ9H5Q4 396 aaKnown RBP8.9□□□□□ -0.98
NEDD1-211ENST00000557454 SPHK1Q9NYA1 384 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 ICKQ9UPZ9 632 aa8.9□□□□□ -0.98
NEDD1-211ENST00000557454 DNMT3AQ9Y6K1 912 aaPredicted RBP8.9□□□□□ -0.98
NEDD1-211ENST00000557454 KMT2CQ8NEZ4 4911 aaKnown RBP8.89□□□□□ -0.99
NEDD1-211ENST00000557454 MPDZO75970 2070 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 PHF3Q92576 2039 aaKnown RBP8.89□□□□□ -0.99
NEDD1-211ENST00000557454 LOC102723996A0A087X1L8 192 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 A0A0G2JK05 382 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 MBD3L4A6NDZ8 208 aaPredicted RBP8.89□□□□□ -0.99
NEDD1-211ENST00000557454 MBD3L5A6NJ08 208 aaPredicted RBP8.89□□□□□ -0.99
NEDD1-211ENST00000557454 GABRR3A8MPY1 467 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 SYT5O00445 386 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 FFAR3O14843 346 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 GPR42O15529 346 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 NME2P1O60361 137 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 SLC25A12O75746 678 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 CYP1A1P04798 512 aaPredicted RBP8.89□□□□□ -0.99
NEDD1-211ENST00000557454 ICAM2P13598 275 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 NME2P22392 152 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 ACVR2AP27037 513 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 RPL7AP62424 266 aaKnown RBP8.89□□□□□ -0.99
NEDD1-211ENST00000557454 PRKG2Q13237 762 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 KLHL10Q6JEL2 608 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 ARHGAP11AQ6P4F7 1023 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 SARM1Q6SZW1 724 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 B3GNT6Q6ZMB0 384 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 TMC3Q7Z5M5 1100 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 CRLF3Q8IUI8 442 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 LGI4Q8N135 537 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 OR2L2Q8NH16 312 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 FLVCR1-AS1Q8TAF5 88 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 IMMP1LQ96LU5 166 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 SH3GL2Q99962 352 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 YIPF4Q9BSR8 244 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 PRR14Q9BWN1 585 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 GPR63Q9BZJ6 419 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 ZNF304Q9HCX3 659 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 BPIFA1Q9NP55 256 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 PNPLA3Q9NST1 481 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 IL1RAPL1Q9NZN1 696 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 CWC15Q9P013 229 aaKnown RBP8.89□□□□□ -0.99
NEDD1-211ENST00000557454 RCOR1Q9UKL0 485 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 KLHL20Q9Y2M5 609 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 ZNF711Q9Y462 761 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 FAM215AQ9Y5M1 114 aa8.89□□□□□ -0.99
NEDD1-211ENST00000557454 TRRAPQ9Y4A5 3859 aa8.88□□□□□ -0.99
NEDD1-211ENST00000557454 A0A087X1B8 175 aa8.88□□□□□ -0.99
NEDD1-211ENST00000557454 FAM237AA0A1B0GTK4 181 aa8.88□□□□□ -0.99
NEDD1-211ENST00000557454 TUBAL3A6NHL2 446 aa8.88□□□□□ -0.99
NEDD1-211ENST00000557454 NPIPA2E9PIF3 369 aa8.88□□□□□ -0.99
NEDD1-211ENST00000557454 NPIPA3F8WFD2 350 aa8.88□□□□□ -0.99
NEDD1-211ENST00000557454 PRPSAP2O60256 369 aa8.88□□□□□ -0.99
NEDD1-211ENST00000557454 UGT1A9O60656 530 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms