RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 SLC32A1Q9H598 525 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 PLXNB3Q9ULL4 1909 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 SCELO95171 688 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 KRT6AP02538 564 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 KRT6BP04259 564 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 UGT2B4P06133 528 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 HNRNPCP07910 306 aaKnown RBP eCLIP17.25■□□□□ 0.35
XRCC3-218ENST00000557439 INHBBP09529 407 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 HTR1BP28222 390 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 GABRR2P28476 465 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 FMO3P31513 532 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 TTKP33981 857 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 KRT6CP48668 564 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 ISL1P61371 349 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 CBX2Q14781 532 aaPredicted RBP17.25■□□□□ 0.35
XRCC3-218ENST00000557439 TTC23Q5W5X9 447 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 GAREM2Q75VX8 874 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 CYP4Z1Q86W10 505 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 DCP2Q8IU60 420 aaKnown RBP17.25■□□□□ 0.35
XRCC3-218ENST00000557439 PLPP6Q8IY26 295 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 GLB1L3Q8NCI6 653 aaPredicted RBP17.25■□□□□ 0.35
XRCC3-218ENST00000557439 CCDC138Q96M89 665 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 COPS8Q99627 209 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 P2RY13Q9BPV8 354 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 RBM4BQ9BQ04 359 aaKnown RBP17.25■□□□□ 0.35
XRCC3-218ENST00000557439 RBM4Q9BWF3 364 aaKnown RBP17.25■□□□□ 0.35
XRCC3-218ENST00000557439 ZDHHC6Q9H6R6 413 aa17.25■□□□□ 0.35
XRCC3-218ENST00000557439 HMX1Q9NP08 348 aaPredicted RBP17.25■□□□□ 0.35
XRCC3-218ENST00000557439 HECAQ9UBI9 543 aaPredicted RBP17.25■□□□□ 0.35
XRCC3-218ENST00000557439 MYO1GB0I1T2 1018 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 HOXA2O43364 376 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 EPHA2P29317 976 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 ALDH4A1P30038 563 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 NSG1P42857 185 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 NRIP1P48552 1158 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 PLEKHG6Q3KR16 790 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 GTF2IRD2BQ6EKJ0 949 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 GRAMD4Q6IC98 578 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 GTF2IRD2Q86UP8 949 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 CALHM3Q86XJ0 350 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 EID3Q8N140 333 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 PJA1Q8NG27 643 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 UBTD2Q8WUN7 234 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 SCAMP4Q969E2 229 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 TRMT2BQ96GJ1 504 aaKnown RBP17.24■□□□□ 0.35
XRCC3-218ENST00000557439 TSEN34Q9BSV6 310 aaKnown RBP17.24■□□□□ 0.35
XRCC3-218ENST00000557439 FUNDC2Q9BWH2 189 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 ABCB8Q9NUT2 735 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 DOLKQ9UPQ8 538 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 INSL5Q9Y5Q6 135 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 BOLA2-SMG1P6H3BVE0 249 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 SLC1A7O00341 560 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 IGSF6O95976 241 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 SRCP12931 536 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 SERPINA4P29622 427 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 CLDN8P56748 225 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 LSM3P62310 102 aaKnown RBP17.24■□□□□ 0.35
XRCC3-218ENST00000557439 IL5RAQ01344 420 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 GRSF1Q12849 480 aaKnown RBP eCLIP17.24■□□□□ 0.35
XRCC3-218ENST00000557439 ATP1A4Q13733 1029 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 ZCCHC8Q6NZY4 707 aaKnown RBP17.24■□□□□ 0.35
XRCC3-218ENST00000557439 BTLAQ7Z6A9 289 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 OR2AP1Q8NGE2 309 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 HDAC2Q92769 488 aaKnown RBP17.24■□□□□ 0.35
XRCC3-218ENST00000557439 PLEKHA8Q96JA3 519 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 RIBC2Q9H4K1 309 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 KCTD5Q9NXV2 234 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 SLCO3A1Q9UIG8 710 aa17.24■□□□□ 0.35
XRCC3-218ENST00000557439 RFXANKO14593 260 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 TOR1BO14657 336 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 BCL10O95999 233 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 HPRP00739 348 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 HALP42357 657 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 C21orf59P57076 290 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 SKIV2LQ15477 1246 aaKnown RBP17.23■□□□□ 0.35
XRCC3-218ENST00000557439 TTLL9Q3SXZ7 439 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 Q6ZNX1 250 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 ZDHHC21Q8IVQ6 265 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 CLECL1Q8IZS7 167 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 AADATQ8N5Z0 425 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 ARL10Q8N8L6 244 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 CHST14Q8NCH0 376 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 OR5K1Q8NHB7 308 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 MTERF1Q99551 399 aaKnown RBP17.23■□□□□ 0.35
XRCC3-218ENST00000557439 KCNH6Q9H252 994 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 PRM3Q9NNZ6 103 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 CDH23Q9H251 3354 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 KCNE1BA0A087WTH5 132 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.23■□□□□ 0.35
XRCC3-218ENST00000557439 SOD2P04179 222 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 JUNBP17275 347 aaPredicted RBP17.23■□□□□ 0.35
XRCC3-218ENST00000557439 MAP2K4P45985 399 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 CASP9P55211 416 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 SMN1Q16637 294 aaKnown RBP17.23■□□□□ 0.35
XRCC3-218ENST00000557439 RBM48Q5RL73 367 aaKnown RBP17.23■□□□□ 0.35
XRCC3-218ENST00000557439 ADHFE1Q8IWW8 467 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 TMEM132CQ8N3T6 1108 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 ZCCHC7Q8N3Z6 543 aaKnown RBP17.23■□□□□ 0.35
XRCC3-218ENST00000557439 UBE2FQ969M7 185 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 PYURFQ96I23 114 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms