RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 ZNF75CPQ92670 426 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-230ENST00000557427 GLYATL1Q969I3 302 aa12.17□□□□□ -0.46
SHMT2-230ENST00000557427 ZNF669Q96BR6 464 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-230ENST00000557427 CPNE1Q99829 537 aa12.17□□□□□ -0.46
SHMT2-230ENST00000557427 TBL1YQ9BQ87 522 aa12.17□□□□□ -0.46
SHMT2-230ENST00000557427 ZSCAN5AQ9BUG6 496 aa12.17□□□□□ -0.46
SHMT2-230ENST00000557427 FSD1LQ9BXM9 530 aa12.17□□□□□ -0.46
SHMT2-230ENST00000557427 IQCGQ9H095 443 aaKnown RBP12.17□□□□□ -0.46
SHMT2-230ENST00000557427 ACTR5Q9H9F9 607 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-230ENST00000557427 MRM3Q9HC36 420 aaKnown RBP12.17□□□□□ -0.46
SHMT2-230ENST00000557427 TRIM39Q9HCM9 518 aa12.17□□□□□ -0.46
SHMT2-230ENST00000557427 SLC17A7Q9P2U7 560 aa12.17□□□□□ -0.46
SHMT2-230ENST00000557427 KLHL3Q9UH77 587 aa12.17□□□□□ -0.46
SHMT2-230ENST00000557427 KCNK6Q9Y257 313 aa12.17□□□□□ -0.46
SHMT2-230ENST00000557427 ARL2BPQ9Y2Y0 163 aa12.17□□□□□ -0.46
SHMT2-230ENST00000557427 TACC2O95359 2948 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 ZCWPW2A0A1B0GU75 182 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 A6NCN8 305 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 ANKUB1A6NFN9 424 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 NUAK1O60285 661 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 CEACAM4O75871 244 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 UGT1A6P19224 532 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 UGT1A1P22309 533 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 UGT1A4P22310 534 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 CRHR1P34998 444 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 ADRA1AP35348 466 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 HMGCLP35914 325 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 GP5P40197 560 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 FASLGP48023 281 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 PEX6Q13608 980 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 DNASE1L3Q13609 305 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 ZKSCAN8Q15776 578 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-230ENST00000557427 DBN1Q16643 649 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-230ENST00000557427 GRTP1Q5TC63 336 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 CGB2Q6NT52 195 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 CRTC3Q6UUV7 619 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 GLT6D1Q7Z4J2 308 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 ADGRG6Q86SQ4 1221 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 TRIM42Q8IWZ5 723 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 TTC30BQ8N4P2 665 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 OR10G6Q8NH81 332 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 SLC37A2Q8TED4 501 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 CT55Q8WUE5 264 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 NCSTNQ92542 709 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 PNPLA2Q96AD5 504 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 AHCYL2Q96HN2 611 aaKnown RBP12.16□□□□□ -0.46
SHMT2-230ENST00000557427 LURAP1Q96LR2 239 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 KIFC1Q9BW19 673 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 ING2Q9H160 280 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 ACTL8Q9H568 366 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 AKIRIN1Q9H9L7 192 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-230ENST00000557427 IL26Q9NPH9 171 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 KLC4Q9NSK0 619 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 PIH1D1Q9NWS0 290 aaKnown RBP12.16□□□□□ -0.46
SHMT2-230ENST00000557427 NSMCE4AQ9NXX6 385 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 ZFATQ9P243 1243 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 PLLPQ9Y342 182 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 DCHS2Q6V1P9 2916 aa12.16□□□□□ -0.46
SHMT2-230ENST00000557427 SVILO95425 2214 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 ARGFXA6NJG6 315 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 KLF11O14901 512 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 STX7O15400 261 aaKnown RBP12.15□□□□□ -0.46
SHMT2-230ENST00000557427 CDK14O94921 469 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 GSTA1P08263 222 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 HLA-DPA1P20036 260 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 CSE1LP55060 971 aaKnown RBP12.15□□□□□ -0.46
SHMT2-230ENST00000557427 ITGA1P56199 1179 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 RPS18P62269 152 aaKnown RBP12.15□□□□□ -0.46
SHMT2-230ENST00000557427 SH3BP2P78314 561 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 FOXM1Q08050 763 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 LAMB3Q13751 1172 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 BMPR2Q13873 1038 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 LRP8Q14114 963 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 CHRNA6Q15825 494 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 PLA2G4EQ3MJ16 856 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 PLEKHN1Q494U1 663 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-230ENST00000557427 ATP13A5Q4VNC0 1218 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 PCID2Q5JVF3 399 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 RNF187Q5TA31 235 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-230ENST00000557427 MROH9Q5TGP6 573 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 DENND5AQ6IQ26 1287 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 FAM151BQ6UXP7 276 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 CISD2Q8N5K1 135 aaKnown RBP12.15□□□□□ -0.46
SHMT2-230ENST00000557427 ISL2Q96A47 359 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 FAM111AQ96PZ2 611 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 SLC38A3Q99624 504 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 RBBP8Q99708 897 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 NUDT9Q9BW91 350 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 MANSC1Q9H8J5 431 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 RMI1Q9H9A7 625 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 ARNT2Q9HBZ2 717 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 HACD3Q9P035 362 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 IL17CQ9P0M4 197 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 TXNDC16Q9P2K2 825 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 TBC1D29Q9UFV1 150 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 SLC23A2Q9UGH3 650 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 TMPRSS11EQ9UL52 423 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 DNAJC16Q9Y2G8 782 aa12.15□□□□□ -0.46
SHMT2-230ENST00000557427 PKP3Q9Y446 797 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms