RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 GABRB2P47870 512 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 EFNA5P52803 228 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 NLRP11P59045 1033 aaKnown RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 ACTR2P61160 394 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 YWHAZP63104 245 aaKnown RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 DYNLT1P63172 113 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 PRKCEQ02156 737 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 KDSRQ06136 332 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 TRPC3Q13507 836 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 SIM2Q14190 667 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 EMC2Q15006 297 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 PDK2Q15119 407 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 PDK3Q15120 406 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 TPSAB1Q15661 275 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 MAPRE1Q15691 268 aaKnown RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 MMEL1Q495T6 779 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 C2CD6Q53TS8 623 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 XKR3Q5GH77 459 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 RARS2Q5T160 578 aaKnown RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 AWAT2Q6E213 333 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 SPOPLQ6IQ16 392 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 ZFP1Q6P2D0 407 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 KLC3Q6P597 504 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 DLK2Q6UY11 383 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 B3GNT6Q6ZMB0 384 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 SETD3Q86TU7 594 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 GATAD2AQ86YP4 633 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 APOBEC3FQ8IUX4 373 aaKnown RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 CDKL3Q8IVW4 592 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 CCDC60Q8IWA6 550 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 BRSK2Q8IWQ3 736 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 UNC45BQ8IWX7 931 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 CTAGE3PQ8IX95 158 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 TTC39CQ8N584 583 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 TEX19Q8NA77 164 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 SLC4A11Q8NBS3 891 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 CMASQ8NFW8 434 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 SPATA18Q8TC71 538 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 GLMPQ8WWB7 406 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 NPIPB3Q92617 1050 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 USP6NLQ92738 828 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 CDKL2Q92772 493 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 CFAP36Q96G28 342 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 PCYT2Q99447 389 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 SERPINI1Q99574 410 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 KLF6Q99612 283 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 KATNAL1Q9BW62 490 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 MRPS26Q9BYN8 205 aaKnown RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 FAM124BQ9H5Z6 455 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 XAB2Q9HCS7 855 aaKnown RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 IRAK4Q9NWZ3 460 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 CHCHD3Q9NX63 227 aaKnown RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 HACD3Q9P035 362 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 C6orf203Q9P0P8 240 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 ARMCX1Q9P291 453 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 PRPF19Q9UMS4 504 aaKnown RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 UBE2J1Q9Y385 318 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 MAD1L1Q9Y6D9 718 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.67□□□□□ -1.66
ATXN3-246ENST00000557030 WDR81Q562E7 1941 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 ARID2Q68CP9 1835 aa4.67□□□□□ -1.66
ATXN3-246ENST00000557030 PAPPA2Q9BXP8 1791 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 CACNA1AO00555 2505 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 IGKV6D-21A0A0A0MT36 114 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 C15orf38-AP3S2A0A0A6YYH1 394 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 GOLGA8QA0A0J9YX86 632 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 SLC22A23A1A5C7 686 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 BCLAF3A2AJT9 711 aaKnown RBP4.66□□□□□ -1.66
ATXN3-246ENST00000557030 GOLGA8OA6NCC3 632 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 FAM159BA6NKW6 160 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 PROB1E7EW31 1015 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 GOLGA8NF8WBI6 632 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 H7C0C1 242 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 K7ERI5 159 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 SLC22A2O15244 555 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 PRPSAP2O60256 369 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 RNASEH1O60930 286 aaKnown RBP4.66□□□□□ -1.66
ATXN3-246ENST00000557030 LRCH4O75427 683 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 TOM1L1O75674 476 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 CNMDO75829 334 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 TRUB2O95900 331 aaKnown RBP4.66□□□□□ -1.66
ATXN3-246ENST00000557030 TNNC2P02585 160 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 EDN1P05305 212 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 CCDC166P0CW27 439 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 CTSAP10619 480 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 MLNP12872 115 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 TCF4P15884 667 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 VCLP18206 1134 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 SERPINB6P35237 376 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 HOXD12P35452 270 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 ARL2P36404 184 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 CPOXP36551 454 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 GARSP41250 739 aaKnown RBP4.66□□□□□ -1.66
ATXN3-246ENST00000557030 ATP5OP48047 213 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 CPA2P48052 419 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 PRKAA2P54646 552 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 SNX16P57768 344 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 ARHGAP8P85298 464 aa4.66□□□□□ -1.66
ATXN3-246ENST00000557030 OGDHQ02218 1023 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms