RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ILKAPQ9H0C8 392 aaPredicted RBP18.07■□□□□ 0.48
CDKN3-209ENST00000556102 ASF1BQ9NVP2 202 aa18.07■□□□□ 0.48
CDKN3-209ENST00000556102 CIDEBQ9UHD4 219 aa18.07■□□□□ 0.48
CDKN3-209ENST00000556102 MASP2O00187 686 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 FKBP9O95302 570 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 ALBP02768 609 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 APRTP07741 180 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 ETS1P14921 441 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 MMP11P24347 488 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 TTPAP49638 278 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 AIMP2Q13155 320 aaKnown RBP18.06■□□□□ 0.48
CDKN3-209ENST00000556102 NR6A1Q15406 480 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 TCTE1Q5JU00 501 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 YOD1Q5VVQ6 348 aaPredicted RBP18.06■□□□□ 0.48
CDKN3-209ENST00000556102 FCRL6Q6DN72 434 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 FIGLAQ6QHK4 219 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 OVCH1Q7RTY7 1134 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 PRUNE1Q86TP1 453 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 LDB1Q86U70 411 aaPredicted RBP18.06■□□□□ 0.48
CDKN3-209ENST00000556102 SLC13A5Q86YT5 568 aaPredicted RBP18.06■□□□□ 0.48
CDKN3-209ENST00000556102 KRT222Q8N1A0 295 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 ZADH2Q8N4Q0 377 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 CISD2Q8N5K1 135 aaKnown RBP18.06■□□□□ 0.48
CDKN3-209ENST00000556102 RNF10Q8N5U6 811 aaKnown RBP18.06■□□□□ 0.48
CDKN3-209ENST00000556102 C1orf54Q8WWF1 131 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 WDR54Q9H977 334 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 ENAMQ9NRM1 1142 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 PAK5Q9P286 719 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 MARCH4Q9P2E8 410 aaPredicted RBP18.06■□□□□ 0.48
CDKN3-209ENST00000556102 SLC39A10Q9ULF5 831 aa18.06■□□□□ 0.48
CDKN3-209ENST00000556102 DSCR3O14972 297 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 CBX6O95503 412 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 GRM7Q14831 915 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 SF1Q15637 639 aaKnown RBP18.05■□□□□ 0.48
CDKN3-209ENST00000556102 PCID2Q5JVF3 399 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 PTRHD1Q6GMV3 140 aaKnown RBP18.05■□□□□ 0.48
CDKN3-209ENST00000556102 TTC23LQ6PF05 361 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 Q6ZS92 163 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 CCDC89Q8N998 374 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 GSDMBQ8TAX9 411 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 UBE2Q2Q8WVN8 375 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 INPP5DQ92835 1189 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 ZNF285Q96NJ3 590 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 PANX3Q96QZ0 392 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 SLC26A1Q9H2B4 701 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 SLC6A20Q9NP91 592 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 CHRAC1Q9NRG0 131 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 CUTCQ9NTM9 273 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 FBXL4Q9UKA2 621 aa18.05■□□□□ 0.48
CDKN3-209ENST00000556102 POLEQ07864 2286 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 CD3EAPO15446 510 aaKnown RBP18.04■□□□□ 0.48
CDKN3-209ENST00000556102 PRICKLE3O43900 615 aaPredicted RBP18.04■□□□□ 0.48
CDKN3-209ENST00000556102 MCM3P25205 808 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 ITGA3P26006 1051 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 GRIA3P42263 894 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 SNX1Q13596 522 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 NKG7Q16617 165 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 CRB2Q5IJ48 1285 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 COX15Q7KZN9 410 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 LURAP1LQ8IV03 231 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 MPP5Q8N3R9 675 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 TTC29Q8NA56 475 aaPredicted RBP18.04■□□□□ 0.48
CDKN3-209ENST00000556102 ZUFSPQ96AP4 578 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 RAD51AP1Q96B01 352 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 SPSB2Q99619 263 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 SELENOSQ9BQE4 189 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 P2RY12Q9H244 342 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 MRM3Q9HC36 420 aaKnown RBP18.04■□□□□ 0.48
CDKN3-209ENST00000556102 ZBTB20Q9HC78 741 aaPredicted RBP18.04■□□□□ 0.48
CDKN3-209ENST00000556102 GNPTGQ9UJJ9 305 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 CDC23Q9UJX2 597 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 NXT1Q9UKK6 140 aaKnown RBP18.04■□□□□ 0.48
CDKN3-209ENST00000556102 PCDHGA10Q9Y5H3 936 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 MRFAP1Q9Y605 127 aa18.04■□□□□ 0.48
CDKN3-209ENST00000556102 COPG1Q9Y678 874 aaKnown RBP18.04■□□□□ 0.48
CDKN3-209ENST00000556102 A1L4Q6 167 aa18.03■□□□□ 0.48
CDKN3-209ENST00000556102 FITM1A5D6W6 292 aa18.03■□□□□ 0.48
CDKN3-209ENST00000556102 TARM1B6A8C7 271 aa18.03■□□□□ 0.48
CDKN3-209ENST00000556102 SOCS6O14544 535 aa18.03■□□□□ 0.48
CDKN3-209ENST00000556102 KPNA5O15131 536 aa18.03■□□□□ 0.48
CDKN3-209ENST00000556102 SESN2P58004 480 aaPredicted RBP18.03■□□□□ 0.48
CDKN3-209ENST00000556102 PRAMEF13Q5VWM6 474 aa18.03■□□□□ 0.48
CDKN3-209ENST00000556102 CUZD1Q86UP6 607 aa18.03■□□□□ 0.48
CDKN3-209ENST00000556102 LRRC6Q86X45 466 aa18.03■□□□□ 0.48
CDKN3-209ENST00000556102 RAB42Q8N4Z0 105 aa18.03■□□□□ 0.48
CDKN3-209ENST00000556102 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.03■□□□□ 0.48
CDKN3-209ENST00000556102 EIF2B3Q9NR50 452 aaKnown RBP18.03■□□□□ 0.48
CDKN3-209ENST00000556102 TREX1Q9NSU2 369 aa18.03■□□□□ 0.48
CDKN3-209ENST00000556102 IL1RAPL1Q9NZN1 696 aa18.03■□□□□ 0.48
CDKN3-209ENST00000556102 ERRFI1Q9UJM3 462 aaPredicted RBP18.03■□□□□ 0.48
CDKN3-209ENST00000556102 CACNA1DQ01668 2161 aa18.03■□□□□ 0.48
CDKN3-209ENST00000556102 WIPF3A6NGB9 483 aa18.02■□□□□ 0.48
CDKN3-209ENST00000556102 SRPX2O60687 465 aaPredicted RBP18.02■□□□□ 0.48
CDKN3-209ENST00000556102 NDUFS3O75489 264 aa18.02■□□□□ 0.48
CDKN3-209ENST00000556102 C1orf105O95561 183 aa18.02■□□□□ 0.48
CDKN3-209ENST00000556102 ZSCAN5DPP0CG00 497 aa18.02■□□□□ 0.48
CDKN3-209ENST00000556102 RPS3P23396 243 aaKnown RBP eCLIP18.02■□□□□ 0.48
CDKN3-209ENST00000556102 RPL22P35268 128 aaKnown RBP18.02■□□□□ 0.48
CDKN3-209ENST00000556102 BDKRB1P46663 353 aa18.02■□□□□ 0.48
CDKN3-209ENST00000556102 FAM214AQ32MH5 1076 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms