RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 LCP2Q13094 533 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 GPR18Q14330 331 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 RBBP7Q16576 425 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 THEMIS2Q5TEJ8 643 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 TCEAL6Q6IPX3 200 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 ZCCHC8Q6NZY4 707 aaKnown RBP10.69□□□□□ -0.7
TMEM260-208ENST00000555905 KANSL1Q7Z3B3 1105 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 THOC6Q86W42 341 aaKnown RBP10.69□□□□□ -0.7
TMEM260-208ENST00000555905 AMIGO1Q86WK6 493 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 GATAD2AQ86YP4 633 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 KLHDC8AQ8IYD2 350 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 ARL14Q8N4G2 192 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 MINDY1Q8N5J2 469 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 TEX9Q8N6V9 391 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 ARL10Q8N8L6 244 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 KYQ8NBH2 561 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 PPFIBP2Q8ND30 876 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 GPR156Q8NFN8 814 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 OR4E2Q8NGC2 313 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 OR2L8Q8NGY9 312 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 OR56A3Q8NH54 315 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 ZNF483Q8TF39 744 aaPredicted RBP10.69□□□□□ -0.7
TMEM260-208ENST00000555905 SMPDL3AQ92484 453 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 TCEAL3Q969E4 200 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 PYCR2Q96C36 320 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 IL17FQ96PD4 163 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.69□□□□□ -0.7
TMEM260-208ENST00000555905 PCBD2Q9H0N5 130 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 GSTO2Q9H4Y5 243 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 XKR8Q9H6D3 395 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 ACSS2Q9NR19 701 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 DNAJC11Q9NVH1 559 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 OR6C2Q9NZP2 312 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 NCDNQ9UBB6 729 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 ICKQ9UPZ9 632 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 PCDHGA10Q9Y5H3 936 aa10.69□□□□□ -0.7
TMEM260-208ENST00000555905 FAM221BA6H8Z2 402 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 RHPN2P1A8MT19 583 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 E7ENX8 843 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 DLL1O00548 723 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 SNNO75324 88 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 OTCP00480 354 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 ZNF883P0CG24 379 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 ARL1P40616 181 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 CDH13P55290 713 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 TBPL1P62380 186 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 LSM11P83369 360 aaKnown RBP eCLIP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 TAP2Q03519 686 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 GALNT1Q10472 559 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 SUZ12Q15022 739 aaKnown RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 INAVAQ3KP66 663 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 ARL13AQ5H913 290 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 PRAMEF13Q5VWM6 474 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 KLHL35Q6PF15 583 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 TMEM26Q6ZUK4 368 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 RPS27LQ71UM5 84 aaKnown RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 GOLGA7Q7Z5G4 137 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 C17orf82Q86X59 251 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 SFTPA2Q8IWL1 248 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 KIRREL3Q8IZU9 778 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 C2orf73Q8N5S3 287 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 OR2I1PQ8NGU4 316 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 OR4C6Q8NH72 309 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 HMGCLL1Q8TB92 370 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 TRPC4APQ8TEL6 797 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 SETD7Q8WTS6 366 aaKnown RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 JPH3Q8WXH2 748 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 ATP6V1E2Q96A05 226 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 MOCOSQ96EN8 888 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 CHMP6Q96FZ7 201 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 C7orf26Q96N11 449 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 NSUN5Q96P11 429 aaKnown RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 SLC38A3Q99624 504 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 MIPEPQ99797 713 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 HAUS8Q9BT25 410 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 MENTQ9BUN1 341 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 SGPP1Q9BX95 441 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 PITPNM3Q9BZ71 974 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 ILKAPQ9H0C8 392 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 IPPKQ9H8X2 491 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 UCK1Q9HA47 277 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 SEMA4BQ9NPR2 832 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-208ENST00000555905 ABCF3Q9NUQ8 709 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 SLC22A14Q9Y267 594 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 DYRK1BQ9Y463 629 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 ASB1Q9Y576 335 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 LAMA1P25391 3075 aa10.68□□□□□ -0.7
TMEM260-208ENST00000555905 VPS13AQ96RL7 3174 aa10.67□□□□□ -0.7
TMEM260-208ENST00000555905 PCM1Q15154 2024 aa10.67□□□□□ -0.7
TMEM260-208ENST00000555905 LNP1A1A4G5 178 aa10.67□□□□□ -0.7
TMEM260-208ENST00000555905 GMNCA6NCL1 334 aa10.67□□□□□ -0.7
TMEM260-208ENST00000555905 CLGNO14967 610 aa10.67□□□□□ -0.7
TMEM260-208ENST00000555905 PPM1DO15297 605 aa10.67□□□□□ -0.7
TMEM260-208ENST00000555905 ITM2AO43736 263 aa10.67□□□□□ -0.7
TMEM260-208ENST00000555905 NUDT21O43809 227 aaKnown RBP10.67□□□□□ -0.7
TMEM260-208ENST00000555905 SHOX2O60902 331 aaPredicted RBP10.67□□□□□ -0.7
TMEM260-208ENST00000555905 LRP3O75074 770 aa10.67□□□□□ -0.7
TMEM260-208ENST00000555905 CRCPO75575 148 aa10.67□□□□□ -0.7
TMEM260-208ENST00000555905 LYPLA1O75608 230 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms