RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 RFPL3O75679 317 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 STK16O75716 305 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 WDR47O94967 919 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 CCNDBP1O95273 360 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 CDK4P11802 303 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 NEFHP12036 1026 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 MTHFD2P13995 350 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 POLR2CP19387 275 aaPredicted RBP12.11□□□□□ -0.47
ABCD4-223ENST00000555904 CSRP1P21291 193 aaKnown RBP12.11□□□□□ -0.47
ABCD4-223ENST00000555904 KCNC1P48547 511 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 PIK3CGP48736 1102 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 ACADVLP49748 655 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 NFKB2Q00653 900 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 TAP2Q03519 686 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 NAE1Q13564 534 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 NAA25Q14CX7 972 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 SETDB1Q15047 1291 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 SF1Q15637 639 aaKnown RBP12.11□□□□□ -0.47
ABCD4-223ENST00000555904 CLPPQ16740 277 aaPredicted RBP12.11□□□□□ -0.47
ABCD4-223ENST00000555904 PERM1Q5SV97 790 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 HHATQ5VTY9 493 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 IRGCQ6NXR0 463 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 METTL2BQ6P1Q9 378 aaKnown RBP12.11□□□□□ -0.47
ABCD4-223ENST00000555904 LRRC70Q7Z2Q7 622 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 C2orf73Q8N5S3 287 aaPredicted RBP12.11□□□□□ -0.47
ABCD4-223ENST00000555904 PTGR2Q8N8N7 351 aaPredicted RBP12.11□□□□□ -0.47
ABCD4-223ENST00000555904 PPFIBP2Q8ND30 876 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 DEFB124Q8NES8 71 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 PPP1R14CQ8TAE6 165 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 DENND1AQ8TEH3 1009 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 PPP4R1Q8TF05 950 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 RSC1A1Q92681 617 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 GFM1Q96RP9 751 aaKnown RBP12.11□□□□□ -0.47
ABCD4-223ENST00000555904 DPYSL5Q9BPU6 564 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 PAIP2Q9BPZ3 127 aaKnown RBP12.11□□□□□ -0.47
ABCD4-223ENST00000555904 HAUS8Q9BT25 410 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 MENTQ9BUN1 341 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 ATG10Q9H0Y0 220 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 OPTCQ9UBM4 332 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 PCDHB11Q9Y5F2 797 aa12.11□□□□□ -0.47
ABCD4-223ENST00000555904 OTOGLQ3ZCN5 2332 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 TARM1B6A8C7 271 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 SLC30A4O14863 429 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 MAP3K7O43318 606 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 KLK8O60259 260 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 KATNA1O75449 491 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 CPNE6O95741 557 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 NR1D1P20393 614 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 EEF1DP29692 281 aaKnown RBP12.1□□□□□ -0.47
ABCD4-223ENST00000555904 OAS2P29728 719 aaKnown RBP12.1□□□□□ -0.47
ABCD4-223ENST00000555904 GGT5P36269 586 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 HSPA7P48741 367 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 NAA20P61599 178 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 HERVK_113P63132 956 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 PPP2R2AP63151 447 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 E2F1Q01094 437 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 SPIDRQ14159 915 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 FASTKQ14296 549 aaKnown RBP12.1□□□□□ -0.47
ABCD4-223ENST00000555904 PTCHD3Q3KNS1 767 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 CFAP157Q5JU67 520 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 PRAMEF13Q5VWM6 474 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 NKAIN2Q5VXU1 208 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 WDR74Q6RFH5 385 aaPredicted RBP12.1□□□□□ -0.47
ABCD4-223ENST00000555904 SUSD1Q6UWL2 747 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 GLRX5Q86SX6 157 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 ADGRF3Q8IZF5 1079 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 ARFGAP2Q8N6H7 521 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 SNX31Q8N9S9 440 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 LINC01555Q8NAE3 123 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 OR56A3Q8NH54 315 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 MGARPQ8TDB4 240 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 UBTD2Q8WUN7 234 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 PYCR2Q96C36 320 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 CD180Q99467 661 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 MIPEPQ99797 713 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 ERVK-6Q9BXR3 956 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 CAPS2Q9BXY5 557 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 CD244Q9BZW8 370 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 RAB33BQ9H082 229 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 C12orf65Q9H3J6 166 aaKnown RBP12.1□□□□□ -0.47
ABCD4-223ENST00000555904 LRRN3Q9H3W5 708 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 INTS7Q9NVH2 962 aaKnown RBP12.1□□□□□ -0.47
ABCD4-223ENST00000555904 ACTR10Q9NZ32 417 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 TAC3Q9UHF0 121 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 PTBP2Q9UKA9 531 aaKnown RBP12.1□□□□□ -0.47
ABCD4-223ENST00000555904 DYRK1BQ9Y463 629 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 KCNE2Q9Y6J6 123 aa12.1□□□□□ -0.47
ABCD4-223ENST00000555904 TDRD6O60522 2096 aaKnown RBP12.1□□□□□ -0.47
ABCD4-223ENST00000555904 ZFC3H1O60293 1989 aaKnown RBP12.1□□□□□ -0.47
ABCD4-223ENST00000555904 G3V2L1 256 aa12.09□□□□□ -0.47
ABCD4-223ENST00000555904 K7EPI3 171 aa12.09□□□□□ -0.47
ABCD4-223ENST00000555904 BTN3A3O00478 584 aa12.09□□□□□ -0.47
ABCD4-223ENST00000555904 BIRC5O15392 142 aa12.09□□□□□ -0.47
ABCD4-223ENST00000555904 CAPN5O15484 640 aaPredicted RBP12.09□□□□□ -0.47
ABCD4-223ENST00000555904 B4GAT1O43505 415 aa12.09□□□□□ -0.47
ABCD4-223ENST00000555904 DLX3O60479 287 aa12.09□□□□□ -0.47
ABCD4-223ENST00000555904 H2AFYO75367 372 aaKnown RBP12.09□□□□□ -0.47
ABCD4-223ENST00000555904 RASSF9O75901 435 aa12.09□□□□□ -0.47
ABCD4-223ENST00000555904 FKBP9O95302 570 aa12.09□□□□□ -0.47
ABCD4-223ENST00000555904 CEACAM1P13688 526 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms