RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 KCNC1P48547 511 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 TRA2AQ13595 282 aaKnown RBP eCLIP13.81□□□□□ -0.2
CHD8-208ENST00000555301 TNFAIP8L3Q5GJ75 292 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 HES3Q5TGS1 186 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 CDCP2Q5VXM1 449 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 SULT1C3Q6IMI6 304 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 CAPN13Q6MZZ7 669 aaPredicted RBP13.81□□□□□ -0.2
CHD8-208ENST00000555301 MBOAT1Q6ZNC8 495 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 TMPRSS12Q86WS5 348 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 CACTIN-AS1Q8N1I8 211 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 C2orf73Q8N5S3 287 aaPredicted RBP13.81□□□□□ -0.2
CHD8-208ENST00000555301 GRAMD1AQ96CP6 724 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 APOPT1Q96IL0 206 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 TGM7Q96PF1 710 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 DEPDC7Q96QD5 511 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 IQCGQ9H095 443 aaKnown RBP13.81□□□□□ -0.2
CHD8-208ENST00000555301 PCBD2Q9H0N5 130 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 ACBD3Q9H3P7 528 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 CNOT10Q9H9A5 744 aaKnown RBP13.81□□□□□ -0.2
CHD8-208ENST00000555301 CCDC177Q9NQR7 707 aaPredicted RBP13.81□□□□□ -0.2
CHD8-208ENST00000555301 SPHK1Q9NYA1 384 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 TMEM216Q9P0N5 145 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 PDP2Q9P2J9 529 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 POMT2Q9UKY4 750 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 TMCO1Q9UM00 188 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 CLCA2Q9UQC9 943 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 PCDHB11Q9Y5F2 797 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 ACTL7BQ9Y614 415 aa13.81□□□□□ -0.2
CHD8-208ENST00000555301 TLCD2A6NGC4 264 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 UBXN8O00124 270 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 MAP2K7O14733 419 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 CASC3O15234 703 aaKnown RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 PRICKLE3O43900 615 aaPredicted RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 SMIM24O75264 130 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 IPO13O94829 963 aaKnown RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 THRAP10827 490 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 HOXB3P14651 431 aaPredicted RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 UGT2B7P16662 529 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 RPA3P35244 121 aaPredicted RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 GFERP55789 205 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 TBPL1P62380 186 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 ZFP36L1Q07352 338 aaKnown RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 NAE1Q13564 534 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 TSTA3Q13630 321 aaPredicted RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 FASTKQ14296 549 aaKnown RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 SLC5A12Q1EHB4 618 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 CCDC153Q494R4 210 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 N4BP2L1Q5TBK1 243 aaPredicted RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 SPESP1Q6UW49 350 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 ZNF574Q6ZN55 896 aaPredicted RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 TAX1BP1Q86VP1 789 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 SLITRK4Q8IW52 837 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 LRRC56Q8IYG6 542 aaPredicted RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 GALNT15Q8N3T1 639 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 GOLGA6L1Q8N7Z2 621 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 BANPQ8N9N5 519 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 PPFIBP2Q8ND30 876 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 OR56A3Q8NH54 315 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 EXT2Q93063 718 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 RHBDF1Q96CC6 855 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 MED8Q96G25 268 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 OR2A14Q96R47 310 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 MIPEPQ99797 713 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 ATG10Q9H0Y0 220 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 TMBIM4Q9HC24 238 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 SSU72Q9NP77 194 aaKnown RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 C1GALT1Q9NS00 363 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 WWOXQ9NZC7 414 aa13.8□□□□□ -0.2
CHD8-208ENST00000555301 ZFC3H1O60293 1989 aaKnown RBP13.8□□□□□ -0.2
CHD8-208ENST00000555301 ARHGEF17Q96PE2 2063 aaPredicted RBP13.79□□□□□ -0.2
CHD8-208ENST00000555301 IGHV5-10-1A0A0J9YXX1 117 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 A0A1W2PPV9 198 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 AGPSO00116 658 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 TK2O00142 265 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 KLK8O60259 260 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 RASSF9O75901 435 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 CCNDBP1O95273 360 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 ANKRD34CP0C6C1 535 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 MTHFD2P13995 350 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 GFAPP14136 432 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 TAC1P20366 129 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 CDH3P22223 829 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 PEBP1P30086 187 aaKnown RBP13.79□□□□□ -0.2
CHD8-208ENST00000555301 CCKBRP32239 447 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 GGT5P36269 586 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 INHBCP55103 352 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 PPP1CAP62136 330 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 ABATP80404 500 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 NAA25Q14CX7 972 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 SF1Q15637 639 aaKnown RBP13.79□□□□□ -0.2
CHD8-208ENST00000555301 THEMIS2Q5TEJ8 643 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 CACHD1Q5VU97 1274 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 SUSD1Q6UWL2 747 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 CDHR3Q6ZTQ4 885 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 FAM92BQ6ZTR7 304 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 TMPRSS9Q7Z410 1059 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 PRSS42Q7Z5A4 293 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 EXOC3L1Q86VI1 746 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 FBXO39Q8N4B4 442 aa13.79□□□□□ -0.2
CHD8-208ENST00000555301 DCBLD1Q8N8Z6 715 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms