RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 TPM1P09493 284 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 OR56A5P0C7T3 313 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 FOXN2P32314 431 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 RAB28P51157 221 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 HADHBP55084 474 aaKnown RBP12.55□□□□□ -0.4
XRCC3-212ENST00000555231 ARG2P78540 354 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 GRM7Q14831 915 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 ARHGEF18Q6ZSZ5 1173 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 VRK3Q8IV63 474 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 VSTM4Q8IW00 320 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 TAB3Q8N5C8 712 aaPredicted RBP12.55□□□□□ -0.4
XRCC3-212ENST00000555231 TTC29Q8NA56 475 aaPredicted RBP12.55□□□□□ -0.4
XRCC3-212ENST00000555231 ITLN2Q8WWU7 325 aaPredicted RBP12.55□□□□□ -0.4
XRCC3-212ENST00000555231 RELTQ969Z4 430 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 LRRC45Q96CN5 670 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 TAAR6Q96RI8 345 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 MENTQ9BUN1 341 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 OSBPL8Q9BZF1 889 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 RUBCNLQ9H714 662 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 PTGFRNQ9P2B2 879 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 STOX2Q9P2F5 926 aaPredicted RBP12.55□□□□□ -0.4
XRCC3-212ENST00000555231 F8P00451 2351 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 C2CD3Q4AC94 2353 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 OTOGQ6ZRI0 2925 aa12.55□□□□□ -0.4
XRCC3-212ENST00000555231 PDZD2O15018 2839 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 TRGV8A0A0C4DH27 118 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 CCDC162PA2VCL2 907 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 VSTM2BA6NLU5 285 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 PCDH17O14917 1159 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 METTL18O95568 372 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 CD9P21926 228 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 RIPPLY3P57055 190 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 VSX2P58304 361 aaPredicted RBP12.54□□□□□ -0.4
XRCC3-212ENST00000555231 KLC1Q07866 573 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 HSPA14Q0VDF9 509 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 GRB7Q14451 532 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 SF1Q15637 639 aaKnown RBP12.54□□□□□ -0.4
XRCC3-212ENST00000555231 ZXDCQ2QGD7 858 aaPredicted RBP12.54□□□□□ -0.4
XRCC3-212ENST00000555231 CCDC38Q502W7 563 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 ZC3H12BQ5HYM0 836 aaKnown RBP12.54□□□□□ -0.4
XRCC3-212ENST00000555231 WASHC2DQ5SRD0 308 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 KCTD11Q693B1 232 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 ZNF324BQ6AW86 544 aaPredicted RBP12.54□□□□□ -0.4
XRCC3-212ENST00000555231 RPUSD3Q6P087 351 aaKnown RBP12.54□□□□□ -0.4
XRCC3-212ENST00000555231 GFRALQ6UXV0 394 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 KLHDC8BQ8IXV7 354 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 AMER2Q8N7J2 671 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 STT3BQ8TCJ2 826 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 LKAAEAR1Q8TD35 194 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 DENND1AQ8TEH3 1009 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 NR4A3Q92570 626 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 VPS50Q96JG6 964 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 ALS2CR12Q96Q35 445 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 LMF1Q96S06 567 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 SELENOSQ9BQE4 189 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 TRIM56Q9BRZ2 755 aaKnown RBP12.54□□□□□ -0.4
XRCC3-212ENST00000555231 SH3BGRL2Q9UJC5 107 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 NXT1Q9UKK6 140 aaKnown RBP12.54□□□□□ -0.4
XRCC3-212ENST00000555231 ITGB1BP2Q9UKP3 347 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 PKDREJQ9NTG1 2253 aa12.54□□□□□ -0.4
XRCC3-212ENST00000555231 CPAMD8Q8IZJ3 1885 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 POLQO75417 2590 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 HEATR9A2RTY3 570 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 MAP2K7O14733 419 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 NRP2O60462 931 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 CTSVO60911 334 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 S1PR4O95977 384 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 HPP00738 406 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 ACPPP15309 386 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 CCR7P32248 378 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 COPS2P61201 443 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 ART3Q13508 389 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 VWA2Q5GFL6 755 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 TCTE1Q5JU00 501 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 YOD1Q5VVQ6 348 aaPredicted RBP12.53□□□□□ -0.4
XRCC3-212ENST00000555231 FRMPD2BQ6IN97 320 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 C11orf63Q6NUN7 778 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 PACS1Q6VY07 963 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 MRGPRGQ86SM5 289 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 SLC22A15Q8IZD6 547 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 SIRT6Q8N6T7 355 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 OR2L8Q8NGY9 312 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 BRIX1Q8TDN6 353 aaKnown RBP12.53□□□□□ -0.4
XRCC3-212ENST00000555231 PSMF1Q92530 271 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 MIEF2Q96C03 454 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 CCDC120Q96HB5 630 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 PPP1R2P1Q96PQ5 205 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 ZNF304Q9HCX3 659 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 LUC7LQ9NQ29 371 aaKnown RBP12.53□□□□□ -0.4
XRCC3-212ENST00000555231 INTS7Q9NVH2 962 aaKnown RBP12.53□□□□□ -0.4
XRCC3-212ENST00000555231 C3orf18Q9UK00 162 aa12.53□□□□□ -0.4
XRCC3-212ENST00000555231 FBN2P35556 2912 aa12.52□□□□□ -0.4
XRCC3-212ENST00000555231 A0A0J9YVX5 310 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 DYTNA2CJ06 578 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 HYKKA2RU49 373 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 KRT87PA6NCN2 255 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 IQCF5A8MTL0 148 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 CCL21O00585 134 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 FFAR3O14843 346 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms