RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 DPH5Q9H2P9 285 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 LHX9Q9NQ69 397 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 FBXO6Q9NRD1 293 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-211ENST00000554310 ZDHHC18Q9NUE0 388 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 PSD3Q9NYI0 1048 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 SPATA7Q9P0W8 599 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 IL17BQ9UHF5 180 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 KCND3Q9UK17 655 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 CROTQ9UKG9 612 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 FBXO5Q9UKT4 447 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 PADI1Q9ULC6 663 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 NFS1Q9Y697 457 aa12.61□□□□□ -0.39
SHMT2-211ENST00000554310 ISM1B1AKI9 464 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 NTRK1P04629 796 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 ENO3P13929 434 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-211ENST00000554310 CYP2A7P20853 494 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 ITGA8P53708 1063 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 ITGA1P56199 1179 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 ARL4CP56559 192 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 CYP4F2P78329 520 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 MPP1Q00013 466 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 CDC20Q12834 499 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 DNASE1L3Q13609 305 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 MSS51Q4VC12 460 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 CDHR3Q6ZTQ4 885 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 KIAA0408Q6ZU52 694 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 NEK10Q6ZWH5 1172 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 CNTN4Q8IWV2 1026 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 OR1L3Q8NH93 324 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 HMGCLL1Q8TB92 370 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 CT55Q8WUE5 264 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 EXTL1Q92935 676 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 RNF31Q96EP0 1072 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 CERS2Q96G23 380 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 IL17FQ96PD4 163 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 FMO2Q99518 471 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 ARHGAP9Q9BRR9 750 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 TXLNGYQ9BZA5 131 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 FAM117AQ9C073 453 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 KLHL25Q9H0H3 589 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 GRHL1Q9NZI5 618 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 SERTAD3Q9UJW9 196 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 RUVBL2Q9Y230 463 aaKnown RBP12.6□□□□□ -0.39
SHMT2-211ENST00000554310 MED16Q9Y2X0 877 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 PCDHGA6Q9Y5G7 932 aa12.6□□□□□ -0.39
SHMT2-211ENST00000554310 HELZ2Q9BYK8 2649 aaKnown RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 SEC16AO15027 2179 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 E7EQ34 232 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 EIF3FO00303 357 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 VPS26AO75436 327 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 BANF1O75531 89 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 CATP04040 527 aaKnown RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 KLK3P07288 261 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 TCN2P20062 427 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 HSD17B3P37058 310 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 RPL21P46778 160 aaKnown RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 ZIC1Q15915 447 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 TBR1Q16650 682 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 ACSBG2Q5FVE4 666 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 ZNF549Q6P9A3 640 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 BORAQ6PGQ7 559 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 ZDHHC24Q6UX98 284 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 ZNF517Q6ZMY9 492 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 GALNT7Q86SF2 657 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 TAX1BP1Q86VP1 789 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 GPR135Q8IZ08 494 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 C2CD4AQ8NCU7 369 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 BBOF1Q8ND07 529 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 GIMAP7Q8NHV1 300 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 N4BP2L2Q92802 583 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 CLIP3Q96DZ5 547 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 MED8Q96G25 268 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 GPR87Q9BY21 358 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 TRIM31Q9BZY9 425 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 ACTR5Q9H9F9 607 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 IARS2Q9NSE4 1012 aaKnown RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 INTS7Q9NVH2 962 aaKnown RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 WHRNQ9P202 907 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 MTRF1LQ9UGC7 380 aaKnown RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 ZC3H7BQ9UGR2 993 aaKnown RBP12.59□□□□□ -0.39
SHMT2-211ENST00000554310 CIDEBQ9UHD4 219 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 ADAM21Q9UKJ8 722 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 CHMP2BQ9UQN3 213 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 SNX24Q9Y343 169 aa12.59□□□□□ -0.39
SHMT2-211ENST00000554310 ARHGEF33A8MVX0 844 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 MYO1CO00159 1063 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 NKX2-8O15522 239 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 PSIP1O75475 530 aaKnown RBP12.58□□□□□ -0.4
SHMT2-211ENST00000554310 RECKO95980 971 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 F7P08709 466 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-211ENST00000554310 HBQ1P09105 142 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 MPC1LP0DKB6 136 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 CBSLP0DN79 551 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 ERVK-10P10266 1014 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 PRKAR1AP10644 381 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 ERGP11308 486 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 MAGP20916 626 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 F8A1P23610 371 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 RORAP35398 523 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 CBSP35520 551 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms