RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TRIM74Q86UV6 250 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TRIM73Q86UV7 250 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 SIX6OS1Q8N1H7 587 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 MINDY1Q8N5J2 469 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 KDM1BQ8NB78 822 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 DDHD1Q8NEL9 900 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 APPL2Q8NEU8 664 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 OSCP1Q8WVF1 389 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 FAM3CQ92520 227 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TFAP2CQ92754 450 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 ATP6V1E2Q96A05 226 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 C18orf25Q96B23 403 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 L3HYPDHQ96EM0 354 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 MSANTD3Q96H12 275 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 CENPNQ96H22 339 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 LCORQ96JN0 433 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 SCYL1Q96KG9 808 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 OR52B2Q96RD2 323 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 RANBP9Q96S59 729 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 HNRNPABQ99729 332 aaKnown RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 PKP2Q99959 881 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TMEM79Q9BSE2 394 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 OSBPL10Q9BXB5 764 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TDRD1Q9BXT4 1180 aaKnown RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 EIF2AQ9BY44 585 aaKnown RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TRIM54Q9BYV2 358 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 MAGEB5Q9BZ81 275 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 NXF3Q9H4D5 531 aaKnown RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 BRD9Q9H8M2 597 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 ZFP14Q9HCL3 533 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TRPV5Q9NQA5 729 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 CNGB3Q9NQW8 809 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 ACSS2Q9NR19 701 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 CCM2LQ9NUG4 571 aaPredicted RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 GPATCH2LQ9NWQ4 482 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 PKD2L2Q9NZM6 624 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 TMEM181Q9P2C4 612 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 DNMT3BQ9UBC3 853 aaKnown RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 ABCD2Q9UBJ2 740 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 FTSJ1Q9UET6 329 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 BLOC1S6Q9UL45 172 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 NDRG2Q9UN36 371 aaKnown RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 ZNF510Q9Y2H8 683 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 HES2Q9Y543 173 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 PCDHGA7Q9Y5G6 932 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 SPO11Q9Y5K1 396 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 PSAT1Q9Y617 370 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 COPG1Q9Y678 874 aaKnown RBP5.82□□□□□ -1.48
VPS33B-203ENST00000554264 SPTBN2O15020 2390 aa5.82□□□□□ -1.48
VPS33B-203ENST00000554264 CACNA1GO43497 2377 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 MAP1BP46821 2468 aaKnown RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 C9orf118A6NHY6 69 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 SAC3D1A6NKF1 404 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 SHISA7A6NL88 538 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 IFRD1O00458 451 aaPredicted RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 SDHDO14521 159 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 MRASO14807 208 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 CFLARO15519 480 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 HTRA2O43464 458 aaPredicted RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 NRP2O60462 931 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 COQ9O75208 318 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 TULP3O75386 442 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 GRAP2O75791 330 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 IPO13O94829 963 aaKnown RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 SUPT7LO94864 414 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 OR6B1O95007 311 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 PAPSS2O95340 614 aaPredicted RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 MATN4O95460 622 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 HPRP00739 348 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 RHOP08100 348 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 ALOX5P09917 674 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 LTA4HP09960 611 aaKnown RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 SLC35E2BP0CK96 405 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 PTPN2P17706 415 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 ARF4P18085 180 aaPredicted RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 WARSP23381 471 aaKnown RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 AKAP5P24588 427 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 CCNCP24863 283 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 EPHA3P29320 983 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 ARRB2P32121 409 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 ADRA1BP35368 520 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 GNL1P36915 607 aaPredicted RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 CD151P48509 253 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 FNTBP49356 437 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 RGS7P49802 495 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 TAF6P49848 677 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 NAGLUP54802 743 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 OSTNP61366 133 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 SEMA3BQ13214 749 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 MTA1Q13330 715 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 TOP3AQ13472 1001 aaPredicted RBP5.81□□□□□ -1.48
VPS33B-203ENST00000554264 LRRC32Q14392 662 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 ZBTB6Q15916 424 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 MOGQ16653 247 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 NHSL2Q5HYW2 709 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 C6orf52Q5T4I8 152 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 VWA5B1Q5TIE3 1220 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 IL23RQ5VWK5 629 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 REP15Q6BDI9 236 aa5.81□□□□□ -1.48
VPS33B-203ENST00000554264 TANGO2Q6ICL3 276 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms