RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 OR4F3Q6IEY1 312 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 NEK5Q6P3R8 708 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 MACC1Q6ZN28 852 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 TPGS1Q6ZTW0 290 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 VTCN1Q7Z7D3 282 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 B3GNT8Q7Z7M8 397 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 RNF180Q86T96 592 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 VRK3Q8IV63 474 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 RBM12BQ8IXT5 1001 aaKnown RBP6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 CRIPAKQ8N1N5 446 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 NXPE1Q8N323 547 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 ARL10Q8N8L6 244 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 OR52E4Q8NGH9 312 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 NDNFQ8TB73 568 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 FBLIM1Q8WUP2 373 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 NODALQ96S42 347 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 CLSTN3Q9BQT9 956 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 BTBD2Q9BX70 525 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 RIBC2Q9H4K1 309 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 RETREG1Q9H6L5 497 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 TRPM5Q9NZQ8 1165 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 VPS4AQ9UN37 437 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 MAN2B2Q9Y2E5 1009 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 hCG_2039718K7EN88 272 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 GFRA2O00451 464 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 NRG2O14511 850 aaPredicted RBP6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 PER2O15055 1255 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 CBFA2T3O75081 653 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 PARNO95453 639 aaKnown RBP6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 CLDN9O95484 217 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 IMPDH2P12268 514 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 EFNA1P20827 205 aaPredicted RBP6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 LHCGRP22888 699 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 IGFBP5P24593 272 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 CCR7P32248 378 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 MAGEA2P43356 314 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 STK19P49842 368 aaPredicted RBP6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 DAPP51397 102 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 CLDN8P56748 225 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 AP1S1P61966 158 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 IL1RL1Q01638 556 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 FPGSQ05932 587 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 SMARCB1Q12824 385 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 ITGADQ13349 1161 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 GTF2H3Q13889 308 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 GBX1Q14549 363 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 SF1Q15637 639 aaKnown RBP6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 ATG9BQ674R7 924 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 DOK6Q6PKX4 331 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 RNF165Q6ZSG1 346 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 TRIM74Q86UV6 250 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 TRIM73Q86UV7 250 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 NPAS4Q8IUM7 802 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZDHHC21Q8IVQ6 265 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 ADHFE1Q8IWW8 467 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 PAF1Q8N7H5 531 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 DCAF4L2Q8NA75 395 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 MCOLN3Q8TDD5 553 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 TRUB1Q8WWH5 349 aaKnown RBP6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 SELENOMQ8WWX9 145 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 PPP1R14BQ96C90 147 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 ERLEC1Q96DZ1 483 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 NRBF2Q96F24 287 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 PYURFQ96I23 114 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 MAGED4Q96JG8 741 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 CCDC138Q96M89 665 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 DPH2Q9BQC3 489 aaPredicted RBP6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 KCNH6Q9H252 994 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 MAGIXQ9H6Y5 334 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 ELAC1Q9H777 363 aaKnown RBP6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 PARVBQ9HBI1 364 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZNF334Q9HCZ1 680 aaPredicted RBP6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 PCDH12Q9NPG4 1184 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 SIRT5Q9NXA8 310 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 ARL15Q9NXU5 204 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 SELENONQ9NZV5 590 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 STOML2Q9UJZ1 356 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 C3orf18Q9UK00 162 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 INTS6Q9UL03 887 aaKnown RBP6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 ERGIC3Q9Y282 383 aa6.75□□□□□ -1.33
LINC-ROR-201ENST00000553704 HELZP42694 1942 aaKnown RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 C16orf96A6NNT2 1141 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 SLC16A6O15403 523 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 NDUFS2O75306 463 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ANGPTL1O95841 491 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 EFEMP2O95967 443 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ITGAMP11215 1152 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 SELPP16109 830 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZNF12P17014 697 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 S100A3P33764 101 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 SPAM1P38567 509 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 CTSOP43234 321 aaPredicted RBP6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 BCAP31P51572 246 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 RAD23AP54725 363 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 VLDLRP98155 873 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 IFITM3Q01628 133 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 RELAQ04206 551 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 BCL2L1Q07817 233 aa6.74□□□□□ -1.33
LINC-ROR-201ENST00000553704 EPS8Q12929 822 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms