RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 TTC29Q8NA56 475 aaPredicted RBP9.55□□□□□ -0.88
ACTN1-208ENST00000553370 Q8NA96 180 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 OR5K2Q8NHB8 316 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 PTERQ96BW5 349 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 SNRNP40Q96DI7 357 aaKnown RBP9.55□□□□□ -0.88
ACTN1-208ENST00000553370 C19orf60Q96EN9 201 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 OR2A14Q96R47 310 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 C19orf43Q9BQ61 176 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 EPS8L2Q9H6S3 715 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 ASF1BQ9NVP2 202 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 ANAPC5Q9UJX4 755 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 FBXL4Q9UKA2 621 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 SLC39A10Q9ULF5 831 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 PLCL2Q9UPR0 1127 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 SLC5A6Q9Y289 635 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 EFR3BQ9Y2G0 817 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 PCDHA3Q9Y5H8 950 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 PKDREJQ9NTG1 2253 aa9.55□□□□□ -0.88
ACTN1-208ENST00000553370 TEP1Q99973 2627 aaKnown RBP9.54□□□□□ -0.88
ACTN1-208ENST00000553370 TRBV5-4A0A0C4DH59 114 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 A0A1B0GX78 115 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 OR51F1A6NGY5 319 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 ENO4A6NNW6 628 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 AGAP14A8MT82 685 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 AP2A1O95782 977 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 APOA4P06727 396 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 ITGAXP20702 1163 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 ARSFP54793 590 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 PRAMEP78395 509 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 HSPA14Q0VDF9 509 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 AIMP2Q13155 320 aaKnown RBP9.54□□□□□ -0.88
ACTN1-208ENST00000553370 RBBP7Q16576 425 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 SLC5A12Q1EHB4 618 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 PLEKHN1Q494U1 663 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-208ENST00000553370 PACS1Q6VY07 963 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 PEX26Q7Z412 305 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 PIANPQ8IYJ0 282 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 TXLNBQ8N3L3 684 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 C2orf73Q8N5S3 287 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-208ENST00000553370 OR6P1Q8NGX9 317 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 SLC22A18Q96BI1 424 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 CDKN2AIPNLQ96HQ2 116 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 FAM60AQ9NP50 221 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 SPHK1Q9NYA1 384 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 CIDEBQ9UHD4 219 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 AMFRQ9UKV5 643 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 FAM169AQ9Y6X4 670 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 CROCCQ5TZA2 2017 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 SCN3AQ9NY46 2000 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 CACNA1CQ13936 2221 aa9.54□□□□□ -0.88
ACTN1-208ENST00000553370 CPAMD8Q8IZJ3 1885 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 SERTM1A2A2V5 107 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 HEATR9A2RTY3 570 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 H7C0S8 307 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 AGPSO00116 658 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 ALOX12BO75342 701 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 KLF7O75840 302 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 RNF224P0DH78 156 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 ERVK-10P10266 1014 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 MAGP20916 626 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 RAB28P51157 221 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 CDH17Q12864 832 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 CDC16Q13042 620 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 TBX2Q13207 712 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 SF1Q15637 639 aaKnown RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 ZIC1Q15915 447 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 TUBB8Q3ZCM7 444 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 FASTKD1Q53R41 847 aaKnown RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 DNAJC21Q5F1R6 531 aaKnown RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 ZC3H12BQ5HYM0 836 aaKnown RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 AARS2Q5JTZ9 985 aaKnown RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 SEL1L2Q5TEA6 688 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 AGAP7PQ5VUJ5 663 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 ZNF787Q6DD87 383 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 DENND5AQ6IQ26 1287 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 AADACL2Q6P093 401 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 LIAT1Q6ZQX7 453 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 PPP1R32Q7Z5V6 425 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 DCUN1D3Q8IWE4 304 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 SYCE1Q8N0S2 351 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 METTL27Q8N6F8 245 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 TC2NQ8N9U0 490 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 PPHLN1Q8NEY8 458 aaKnown RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 FKBP10Q96AY3 582 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 MAGEB10Q96LZ2 347 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 AGAP4Q96P64 663 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 WDR77Q9BQA1 342 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 SELENOSQ9BQE4 189 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 RAB11FIP5Q9BXF6 653 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 ARNT2Q9HBZ2 717 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 MRM3Q9HC36 420 aaKnown RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 EURLQ9NYK6 297 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 ERRFI1Q9UJM3 462 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-208ENST00000553370 KLHL20Q9Y2M5 609 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 PRSS21Q9Y6M0 314 aa9.53□□□□□ -0.88
ACTN1-208ENST00000553370 CCDC162PA2VCL2 907 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 LDLRP01130 860 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 IFNB1P01574 187 aa9.52□□□□□ -0.89
ACTN1-208ENST00000553370 COL8A1P27658 744 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms