RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, human

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-217	ENST00000553065	SOX13	Q9UN79	622 aa		10.13	□□□□□ -0.79
DDX23-217	ENST00000553065	PLCL2	Q9UPR0	1127 aa		10.13	□□□□□ -0.79
DDX23-217	ENST00000553065	PTRH2	Q9Y3E5	179 aa	Known RBP	10.13	□□□□□ -0.79
DDX23-217	ENST00000553065	KLK4	Q9Y5K2	254 aa		10.13	□□□□□ -0.79
DDX23-217	ENST00000553065	AP1M2	Q9Y6Q5	423 aa		10.13	□□□□□ -0.79
DDX23-217	ENST00000553065	RP1L1	Q8IWN7	2480 aa	Predicted RBP	10.13	□□□□□ -0.79
DDX23-217	ENST00000553065	MDC1	Q14676	2089 aa	Known RBP	10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	IGKV1-8	A0A0C4DH67	115 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	ZCWPW2	A0A1B0GU75	182 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	FITM1	A5D6W6	292 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	ZSCAN9	O15535	394 aa	Predicted RBP	10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	HBQ1	P09105	142 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	GNLY	P22749	145 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	OTX2	P32243	289 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	TTPA	P49638	278 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	PGD	P52209	483 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	EFNA3	P52797	238 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	SOX8	P57073	446 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	BASP1	P80723	227 aa	Known RBP	10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	CYP2A13	Q16696	494 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	SYTL3	Q4VX76	610 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	ACSBG2	Q5FVE4	666 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	HIST2H2BC	Q6DN03	193 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	TLDC1	Q6P9B6	456 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	MED25	Q71SY5	747 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	OVCH1	Q7RTY7	1134 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	MRGPRE	Q86SM8	312 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	DCUN1D3	Q8IWE4	304 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	REXO1L1P	Q8IX06	675 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	LRRC56	Q8IYG6	542 aa	Predicted RBP	10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	GPR135	Q8IZ08	494 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	ARHGEF39	Q8N4T4	335 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	TMEM102	Q8N9M5	508 aa	Predicted RBP	10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	OR2Y1	Q8NGV0	311 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	GIMAP7	Q8NHV1	300 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	HMGCLL1	Q8TB92	370 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	FAM136A	Q96C01	138 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	SIGLEC10	Q96LC7	697 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	SPSB2	Q99619	263 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	DHRS4	Q9BTZ2	278 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	BFAR	Q9NZS9	450 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	ZKSCAN5	Q9Y2L8	839 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	CRYL1	Q9Y2S2	319 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	PPP2R2C	Q9Y2T4	447 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	DOCK10	Q96BY6	2186 aa		10.12	□□□□□ -0.79
DDX23-217	ENST00000553065	ICE1	Q9Y2F5	2266 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	VSTM2B	A6NLU5	285 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	TTLL8	A6PVC2	850 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	TCP11X1	B4DZS4	312 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	SOCS6	O14544	535 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	SEMA7A	O75326	666 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	ALOX12B	O75342	701 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	NDUFS3	O75489	264 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	GAS8	O95995	478 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	APOA4	P06727	396 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	ERG	P11308	486 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	AGXT	P21549	392 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	ALAS2	P22557	587 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	MAGEA3	P43357	314 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	OR1D4	P47884	311 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	VPS41	P49754	854 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	CLCN7	P51798	805 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	ADAR	P55265	1226 aa	Known RBP	10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	EIF3B	P55884	814 aa	Known RBP	10.11	□□□□□ -0.79
DDX23-217	ENST00000553065		Q0VFX4	171 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	SF1	Q15637	639 aa	Known RBP	10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	INPP5J	Q15735	1006 aa	Predicted RBP	10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	NKG7	Q16617	165 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	CYP1B1	Q16678	543 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	ZXDC	Q2QGD7	858 aa	Predicted RBP	10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	ANKRD20A4	Q4UJ75	823 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	DCAF10	Q5QP82	559 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	SLC6A19	Q695T7	634 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	PTRHD1	Q6GMV3	140 aa	Known RBP	10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	C4orf22	Q6V702	233 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	TTLL10	Q6ZVT0	673 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	DENND6A	Q8IWF6	608 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	OR2L3	Q8NG85	312 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	CPT1C	Q8TCG5	803 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	PROKR1	Q8TCW9	393 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	COG1	Q8WTW3	980 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	ZUFSP	Q96AP4	578 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	RAD51AP1	Q96B01	352 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	PTER	Q96BW5	349 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	MIPEP	Q99797	713 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	PLAC1	Q9HBJ0	212 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	SLC6A20	Q9NP91	592 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	P4HTM	Q9NXG6	502 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	IFT80	Q9P2H3	777 aa	Predicted RBP	10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	PCDHGB7	Q9Y5F8	929 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	CSAG2	Q9Y5P2	127 aa		10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	SPTAN1	Q13813	2472 aa	Known RBP	10.11	□□□□□ -0.79
DDX23-217	ENST00000553065	OR2A25	A4D2G3	310 aa		10.1	□□□□□ -0.79
DDX23-217	ENST00000553065	ARHGEF33	A8MVX0	844 aa		10.1	□□□□□ -0.79
DDX23-217	ENST00000553065	TARM1	B6A8C7	271 aa		10.1	□□□□□ -0.79
DDX23-217	ENST00000553065	PSIP1	O75475	530 aa	Known RBP	10.1	□□□□□ -0.79
DDX23-217	ENST00000553065	KRT14	P02533	472 aa		10.1	□□□□□ -0.79
DDX23-217	ENST00000553065	CCDC175	P0C221	793 aa		10.1	□□□□□ -0.79
DDX23-217	ENST00000553065	GABRB3	P28472	473 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms