RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 VPS35Q96QK1 796 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 LMF1Q96S06 567 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 MESP1Q9BRJ9 268 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 ADGRE3Q9BY15 652 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 PITPNM3Q9BZ71 974 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 ENKD1Q9H0I2 346 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.16□□□□□ -1.583e-6■■□□□ 12.9
HOXB3-213ENST00000552000 SRMSQ9H3Y6 488 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 UGT1A7Q9HAW7 530 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 UGT1A10Q9HAW8 530 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 UGT1A8Q9HAW9 530 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 PCDH18Q9HCL0 1135 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 FAM60AQ9NP50 221 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 SLC22A11Q9NSA0 550 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.16□□□□□ -1.58
HOXB3-213ENST00000552000 PARVAQ9NVD7 372 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 IRAK4Q9NWZ3 460 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 ABI3Q9P2A4 366 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 HS3ST3B1Q9Y662 390 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 AP1M2Q9Y6Q5 423 aa5.16□□□□□ -1.58
HOXB3-213ENST00000552000 SCN3AQ9NY46 2000 aa5.15□□□□□ -1.58
HOXB3-213ENST00000552000 C17orf113A0A1B0GUU1 675 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 FAM221AA4D161 298 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 MGAT4DA6NG13 374 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 H3BMH7 237 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 MATN2O00339 956 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 BTN3A1O00481 513 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 AURKAO14965 403 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 GADD45BO75293 160 aaPredicted RBP5.15□□□□□ -1.59
HOXB3-213ENST00000552000 CRYABP02511 175 aaKnown RBP5.15□□□□□ -1.59
HOXB3-213ENST00000552000 UQCRHP07919 91 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 SLC35G4P0C7Q5 338 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 NDUFS1P28331 727 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 DNAJA1P31689 397 aaKnown RBP5.15□□□□□ -1.59
HOXB3-213ENST00000552000 PCK1P35558 622 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 GABRA4P48169 554 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 TNFSF10P50591 281 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 PMP22Q01453 160 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 LTBQ06643 244 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 GALNT2Q10471 571 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 FOXD4Q12950 439 aaPredicted RBP5.15□□□□□ -1.59
HOXB3-213ENST00000552000 KRT81Q14533 505 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 INAQ16352 499 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 IFI16Q16666 785 aaKnown RBP5.15□□□□□ -1.59
HOXB3-213ENST00000552000 BOLA3Q53S33 107 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 LDLRAP1Q5SW96 308 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 FNBP1LQ5T0N5 605 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 CCDC122Q5T0U0 273 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 GPRC6AQ5T6X5 926 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 TIGD7Q6NT04 549 aaPredicted RBP5.15□□□□□ -1.59
HOXB3-213ENST00000552000 Q71RC1 249 aaPredicted RBP5.15□□□□□ -1.59
HOXB3-213ENST00000552000 DET1Q7L5Y6 550 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 TAOK1Q7L7X3 1001 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 DAAM2Q86T65 1068 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 NT5DC3Q86UY8 548 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 HOOK3Q86VS8 718 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 LILRA3Q8N6C8 439 aaPredicted RBP5.15□□□□□ -1.59
HOXB3-213ENST00000552000 SIRT6Q8N6T7 355 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 ACBD4Q8NC06 268 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 CHDHQ8NE62 594 aaPredicted RBP5.15□□□□□ -1.59
HOXB3-213ENST00000552000 ACVR1CQ8NER5 493 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 OR11G2Q8NGC1 345 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 BRSK1Q8TDC3 778 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 FBLIM1Q8WUP2 373 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 FAM168AQ92567 244 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 MAGED4Q96JG8 741 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 TRIB3Q96RU7 358 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 TMEM121Q9BTD3 319 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 ACBD3Q9H3P7 528 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 XKR8Q9H6D3 395 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 SOX17Q9H6I2 414 aaPredicted RBP5.15□□□□□ -1.59
HOXB3-213ENST00000552000 MAGEE1Q9HCI5 957 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 HAUS2Q9NVX0 235 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 ACTR10Q9NZ32 417 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 PTGFRNQ9P2B2 879 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 AMACRQ9UHK6 382 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 ACSL5Q9ULC5 683 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 SPO11Q9Y5K1 396 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.15□□□□□ -1.59
HOXB3-213ENST00000552000 COLEC10Q9Y6Z7 277 aa5.15□□□□□ -1.59
HOXB3-213ENST00000552000 C2orf74A8MZ97 194 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 FAM227AF5H4B4 570 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 KCNK1O00180 336 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 ZNHIT1O43257 154 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 USP1O94782 785 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 RASAL1O95294 804 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 CD48P09326 243 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 MSH3P20585 1137 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 ITGAXP20702 1163 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 CCNCP24863 283 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 AKT1P31749 480 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 ZBTB17Q13105 803 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 PRKG2Q13237 762 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 PPP2R5EQ16537 467 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 NKG7Q16617 165 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 LONRF2Q1L5Z9 754 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 TCP11X2Q5H9J9 407 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 NCBP2-AS2Q69YL0 99 aa5.14□□□□□ -1.59
HOXB3-213ENST00000552000 TLDC1Q6P9B6 456 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms