RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CMTM7Q96FZ5 175 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 TMEM74Q96NL1 305 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 FRG2BQ96QU4 278 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 OR4K3Q96R72 315 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 UHRF1Q96T88 793 aaPredicted RBP11.18□□□□□ -0.62
RAB5C-208ENST00000551338 ZBTB18Q99592 522 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 CGREF1Q99674 301 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 ELOVL6Q9H5J4 265 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 CLMPQ9H6B4 373 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 NANOGQ9H9S0 305 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 ACTR3BQ9P1U1 418 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 LRP4O75096 1905 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 C17orf113A0A1B0GUU1 675 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 TCRBV5S2A0A599 114 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 AQP12BA6NM10 295 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 ARPC2O15144 300 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 POP7O75817 140 aaKnown RBP11.17□□□□□ -0.62
RAB5C-208ENST00000551338 STAMBPO95630 424 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 PCCBP05166 539 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 PRPS2P11908 318 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 SDC1P18827 310 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 CASP2P42575 452 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 IRF8Q02556 426 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 ZNF33BQ06732 778 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 CSTF3Q12996 717 aaKnown RBP11.17□□□□□ -0.62
RAB5C-208ENST00000551338 BLMHQ13867 455 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 DOC2AQ14183 400 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 E2F2Q14209 437 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 NFE2L1Q14494 772 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 FXNQ16595 210 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 FAM174BQ3ZCQ3 159 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 SPANXN4Q5MJ08 99 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 HMBOX1Q6NT76 420 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 FAM83HQ6ZRV2 1179 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-208ENST00000551338 HEATR4Q86WZ0 1026 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 HID1Q8IV36 788 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 AQP12AQ8IXF9 295 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 LRRC56Q8IYG6 542 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-208ENST00000551338 PLCD3Q8N3E9 789 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 KRTCAP2Q8N6L1 136 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 ZNF513Q8N8E2 541 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-208ENST00000551338 GLB1L3Q8NCI6 653 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-208ENST00000551338 ADCY4Q8NFM4 1077 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 OR2L2Q8NH16 312 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 ZNF480Q8WV37 535 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 SLC13A3Q8WWT9 602 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 APIPQ96GX9 242 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 HIC2Q96JB3 615 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 ZNF514Q96K75 400 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-208ENST00000551338 LRGUKQ96M69 825 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 FOPNLQ96NB1 174 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 TRMT61BQ9BVS5 477 aaKnown RBP11.17□□□□□ -0.62
RAB5C-208ENST00000551338 TRIM15Q9C019 465 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 ALG2Q9H553 416 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 SERGEFQ9UGK8 458 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 EGFL7Q9UHF1 273 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 GPR34Q9UPC5 381 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 USP22Q9UPT9 525 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 AP4S1Q9Y587 144 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 SNX13Q9Y5W8 968 aa11.17□□□□□ -0.62
RAB5C-208ENST00000551338 MGAT4DA6NG13 374 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 IGLON5A6NGN9 336 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 K7EQS6 105 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 CLGNO14967 610 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 DFNA5O60443 496 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 SLC16A8O95907 504 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 ADH1BP00325 375 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 UQCRBP14927 111 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 ACPPP15309 386 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 AMD1P17707 334 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 C5AR1P21730 350 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 HRH2P25021 359 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 TACR1P25103 407 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 ACADLP28330 430 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 HTR1EP28566 365 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 HNF4AP41235 474 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 GRIA3P42263 894 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 KIR2DL1P43626 348 aaPredicted RBP11.16□□□□□ -0.62
RAB5C-208ENST00000551338 GALK1P51570 392 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 CCR3P51677 355 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 CLDN8P56748 225 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 TBPL1P62380 186 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 CDK3Q00526 305 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 AGERQ15109 404 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 WSCD2Q2TBF2 565 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 XKR6Q5GH73 641 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 ZNF776Q68DI1 518 aaPredicted RBP11.16□□□□□ -0.62
RAB5C-208ENST00000551338 CES5AQ6NT32 575 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 PNCKQ6P2M8 343 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 DOK6Q6PKX4 331 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.16□□□□□ -0.62
RAB5C-208ENST00000551338 MSRB3Q8IXL7 192 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 CHPFQ8IZ52 775 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 ADGRG5Q8IZF4 528 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 HDDC3Q8N4P3 179 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 GOLM1Q8NBJ4 401 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 CATSPER1Q8NEC5 780 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 CANT1Q8WVQ1 401 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 LRTOMTQ8WZ04 291 aa11.16□□□□□ -0.62
RAB5C-208ENST00000551338 GTF2H4Q92759 462 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms