RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 EXT2Q93063 718 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 RHBDF1Q96CC6 855 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 OPTNQ96CV9 577 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 RMDN2Q96LZ7 410 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 OR6C1Q96RD1 312 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 OLFM1Q99784 485 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 ABHD6Q9BV23 337 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 TUBB2BQ9BVA1 445 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 WNT5BQ9H1J7 359 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 TBC1D17Q9HA65 648 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 PLAC1Q9HBJ0 212 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 CWC25Q9NXE8 425 aaPredicted RBP5.15□□□□□ -1.59
CPSF6-206ENST00000550987 COX11Q9Y6N1 276 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 LRRK2Q5S007 2527 aa5.15□□□□□ -1.59
CPSF6-206ENST00000550987 GOLGA6L9A6NEM1 432 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 FAM90A26D6RGX4 464 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 DNM1LO00429 736 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 PLK4O00444 970 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 CYR61O00622 381 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 PRRG2O14669 202 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 SERPINI2O75830 405 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 GBAP04062 536 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 CASTP20810 708 aaKnown RBP5.14□□□□□ -1.59
CPSF6-206ENST00000550987 MXI1P50539 228 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 CLCNKAP51800 687 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 UBXN1Q04323 297 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 ZNF674Q2M3X9 581 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 SMU1Q2TAY7 513 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 CCDC92Q53HC0 331 aaPredicted RBP5.14□□□□□ -1.59
CPSF6-206ENST00000550987 LCN10Q6JVE6 187 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 ZNF534Q76KX8 674 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 HOOK3Q86VS8 718 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 FOXRED2Q8IWF2 684 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 ZNF595Q8IYB9 648 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 PM20D2Q8IYS1 436 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 SLC38A9Q8NBW4 561 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 ZNF548Q8NEK5 533 aaPredicted RBP5.14□□□□□ -1.59
CPSF6-206ENST00000550987 MAGEC3Q8TD91 643 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 SPSB1Q96BD6 273 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 COQ8BQ96D53 544 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 MTBPQ96DY7 904 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 STAMBPL1Q96FJ0 436 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 SFXN2Q96NB2 322 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 CRAMP1Q96RY5 1269 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 GFI1Q99684 422 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 POT1Q9NUX5 634 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 PRMT7Q9NVM4 692 aaPredicted RBP5.14□□□□□ -1.59
CPSF6-206ENST00000550987 RCC2Q9P258 522 aaKnown RBP5.14□□□□□ -1.59
CPSF6-206ENST00000550987 TINAGQ9UJW2 476 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 CPSF3Q9UKF6 684 aaKnown RBP5.14□□□□□ -1.59
CPSF6-206ENST00000550987 FZD10Q9ULW2 581 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 SNX7Q9UNH6 387 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 KCNK7Q9Y2U2 307 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 FN1P02751 2386 aaKnown RBP5.14□□□□□ -1.59
CPSF6-206ENST00000550987 RTL9Q8NET4 1388 aa5.14□□□□□ -1.59
CPSF6-206ENST00000550987 IGHV4-28A0A0C4DH34 117 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 BICDL2A1A5D9 508 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 ANKUB1A6NFN9 424 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 WIPF3A6NGB9 483 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 ZNF263O14978 683 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 GOSR1O95249 250 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 MOCS3O95396 460 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 CELA2AP08217 269 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 VIMP08670 466 aaKnown RBP5.13□□□□□ -1.59
CPSF6-206ENST00000550987 PRF1P14222 555 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 ELAVL4P26378 380 aaKnown RBP5.13□□□□□ -1.59
CPSF6-206ENST00000550987 CDC25CP30307 473 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 HNF4AP41235 474 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 SLC9A3P48764 834 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 PLCD1P51178 756 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 CTSCP53634 463 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
CPSF6-206ENST00000550987 HNF4GQ14541 408 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 MTX3Q5HYI7 312 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 C6orf136Q5SQH8 315 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 IRF2BP2Q7Z5L9 587 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 MRPL10Q7Z7H8 261 aaKnown RBP5.13□□□□□ -1.59
CPSF6-206ENST00000550987 PIM3Q86V86 326 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 MAP7D3Q8IWC1 876 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 TUSC5Q8IXB3 177 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 MAML2Q8IZL2 1156 aaPredicted RBP5.13□□□□□ -1.59
CPSF6-206ENST00000550987 SUMF1Q8NBK3 374 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 SPC24Q8NBT2 197 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 OR14A16Q8NHC5 309 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 WFIKKN2Q8TEU8 576 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 WASF1Q92558 559 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 MR1Q95460 341 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 MTERF3Q96E29 417 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 SPDL1Q96EA4 605 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 CAMK1GQ96NX5 476 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 QRFPRQ96P65 431 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 KATNB1Q9BVA0 655 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 FUT8Q9BYC5 575 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 PCED1AQ9H1Q7 454 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 SEMA6AQ9H2E6 1030 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 FOXP1Q9H334 677 aaPredicted RBP5.13□□□□□ -1.59
CPSF6-206ENST00000550987 HHATLQ9HCP6 504 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 HIF1ANQ9NWT6 349 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 TBC1D7Q9P0N9 293 aa5.13□□□□□ -1.59
CPSF6-206ENST00000550987 FRMD4BQ9Y2L6 1034 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms