RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 FAM214AQ32MH5 1076 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 TUBB8Q3ZCM7 444 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 DNAJC21Q5F1R6 531 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 TCTE1Q5JU00 501 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 DARS2Q6PI48 645 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 FAM180AQ6UWF9 173 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 COX15Q7KZN9 410 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 CCDC50Q8IVM0 306 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 CDKL3Q8IVW4 592 aaPredicted RBP9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 BCORP1Q8N888 145 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 CATSPER1Q8NEC5 780 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 CCDC110Q8TBZ0 833 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 ELMO1Q92556 727 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 HAS2Q92819 552 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 ZUFSPQ96AP4 578 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 THOC3Q96J01 351 aaKnown RBP9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 MENTQ9BUN1 341 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 CUTCQ9NTM9 273 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 IRAK4Q9NWZ3 460 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 PCDHA3Q9Y5H8 950 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 PRSS21Q9Y6M0 314 aa9.44□□□□□ -0.9
TRAFD1-207ENST00000550051 F8W8V4 182 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 PRICKLE3O43900 615 aaPredicted RBP9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 FKBP9O95302 570 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 S1PR4O95977 384 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 HPP00738 406 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 TPM1P09493 284 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 OR56A5P0C7T3 313 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 MAGP20916 626 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 PKLRP30613 574 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 PTPN7P35236 360 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 PTGER4P35408 488 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 MAGEA1P43355 309 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 MARCKSL1P49006 195 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 CARSP49589 748 aaKnown RBP9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 SPARCL1Q14515 664 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 BRD3Q15059 726 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 CCDC181Q5TID7 509 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 ATG9BQ674R7 924 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 C11orf63Q6NUN7 778 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 FIGLAQ6QHK4 219 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 FJX1Q86VR8 437 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 FAM20CQ8IXL6 584 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 SLC22A15Q8IZD6 547 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 LINC01555Q8NAE3 123 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 OR1N1Q8NGS0 311 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 PSMF1Q92530 271 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 KRT35Q92764 455 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 GOLPH3Q9H4A6 298 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 OLAHQ9NV23 265 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 INTS7Q9NVH2 962 aaKnown RBP9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 KLK4Q9Y5K2 254 aa9.43□□□□□ -0.9
TRAFD1-207ENST00000550051 A0A1W2PQ72 361 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 PSMD3O43242 534 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 CBFA2T2O43439 604 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 MFAP3LO75121 409 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 ALOX12BO75342 701 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 GPC4O75487 556 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 TPH1P17752 444 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 FDXRP22570 491 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 MSNP26038 577 aaKnown RBP9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 GRNP28799 593 aaKnown RBP9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 GRIA3P42263 894 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 TNFSF10P50591 281 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 TDGF1P3P51864 188 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 GRB7Q14451 532 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 SF1Q15637 639 aaKnown RBP9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 INAQ16352 499 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 RBBP7Q16576 425 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 PRMT9Q6P2P2 845 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 LINC00696Q6ZRV3 163 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 SHISA6Q6ZSJ9 500 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 MICALCLQ6ZW33 695 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 VSTM4Q8IW00 320 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 KBTBD2Q8IY47 623 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 LMNTD1Q8N9Z9 388 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 OR2L8Q8NGY9 312 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 ASZ1Q8WWH4 475 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 ITLN2Q8WWU7 325 aaPredicted RBP9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 NR4A3Q92570 626 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 CNDP1Q96KN2 507 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 ALS2CR12Q96Q35 445 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 TAAR6Q96RI8 345 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 TTC1Q99614 292 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 CARD6Q9BX69 1037 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 OSBPL8Q9BZF1 889 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 SOX17Q9H6I2 414 aaPredicted RBP9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 ZNF304Q9HCX3 659 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 CHST11Q9NPF2 352 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 CTSFQ9UBX1 484 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 PLAGL1Q9UM63 463 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 KLHL20Q9Y2M5 609 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 FBN2P35556 2912 aa9.42□□□□□ -0.9
TRAFD1-207ENST00000550051 ANKRD17O75179 2603 aaKnown RBP9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 IGLV3-12A0A075B6K2 115 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 TRAV17A0A0B4J275 112 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 DYTNA2CJ06 578 aa9.41□□□□□ -0.9
TRAFD1-207ENST00000550051 HYKKA2RU49 373 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms