RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 CDC23Q9UJX2 597 aa9.27□□□□□ -0.93
GCN1-205ENST00000548821 R3HDM2Q9Y2K5 976 aaKnown RBP9.27□□□□□ -0.93
GCN1-205ENST00000548821 COMMD10Q9Y6G5 202 aa9.27□□□□□ -0.93
GCN1-205ENST00000548821 UBR5O95071 2799 aaPredicted RBP9.27□□□□□ -0.93
GCN1-205ENST00000548821 BOD1L1Q8NFC6 3051 aa9.27□□□□□ -0.93
GCN1-205ENST00000548821 CLEC18AA5D8T8 446 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 PABPN1LA6NDY0 278 aaKnown RBP9.26□□□□□ -0.93
GCN1-205ENST00000548821 OR51F1A6NGY5 319 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 OR1I1O60431 355 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 SORBS2O94875 1100 aaKnown RBP9.26□□□□□ -0.93
GCN1-205ENST00000548821 ONECUT2O95948 504 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 CATP04040 527 aaKnown RBP9.26□□□□□ -0.93
GCN1-205ENST00000548821 CBSLP0DN79 551 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 TPSB2P20231 275 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 HRH2P25021 359 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 ITGA3P26006 1051 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 CBSP35520 551 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 CSE1LP55060 971 aaKnown RBP9.26□□□□□ -0.93
GCN1-205ENST00000548821 PER3P56645 1201 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 SESN2P58004 480 aaPredicted RBP9.26□□□□□ -0.93
GCN1-205ENST00000548821 SRSF1Q07955 248 aaKnown RBP eCLIP9.26□□□□□ -0.93
GCN1-205ENST00000548821 CHAF1BQ13112 559 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 THOC5Q13769 683 aaKnown RBP9.26□□□□□ -0.93
GCN1-205ENST00000548821 TPSAB1Q15661 275 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 MUM1Q2TAK8 710 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 NADK2Q4G0N4 442 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 C4orf17Q53FE4 359 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 PRAMEF17Q5VTA0 474 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 C1orf189Q5VU69 101 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 ZNF385CQ66K41 422 aaPredicted RBP9.26□□□□□ -0.93
GCN1-205ENST00000548821 CPZQ66K79 652 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 LRRC8EQ6NSJ5 796 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 MRPL14Q6P1L8 145 aaKnown RBP9.26□□□□□ -0.93
GCN1-205ENST00000548821 CLEC18BQ6UXF7 455 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 PALM2Q8IXS6 379 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 GPATCH11Q8N954 259 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 SPC24Q8NBT2 197 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 CLEC18CQ8NCF0 446 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 MCOLN3Q8TDD5 553 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 NAT14Q8WUY8 206 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 ATG4AQ8WYN0 398 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 RERGQ96A58 199 aaPredicted RBP9.26□□□□□ -0.93
GCN1-205ENST00000548821 RNF31Q96EP0 1072 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 MVB12AQ96EY5 273 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 RUFY1Q96T51 708 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 DESI2Q9BSY9 194 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 FAM129AQ9BZQ8 928 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 ZNF304Q9HCX3 659 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 FAM60AQ9NP50 221 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 CUTCQ9NTM9 273 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 INTS10Q9NVR2 710 aaKnown RBP9.26□□□□□ -0.93
GCN1-205ENST00000548821 PIH1D1Q9NWS0 290 aaKnown RBP9.26□□□□□ -0.93
GCN1-205ENST00000548821 KLK4Q9Y5K2 254 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 COPG1Q9Y678 874 aaKnown RBP9.26□□□□□ -0.93
GCN1-205ENST00000548821 PRSS21Q9Y6M0 314 aa9.26□□□□□ -0.93
GCN1-205ENST00000548821 HYKKA2RU49 373 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 K7EM74 188 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 ZBTB14O43829 449 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 FGGP02679 453 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 UQCRHP07919 91 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 ANXA5P08758 320 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 PRSS56P0CW18 603 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 MLNP12872 115 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 OGNP20774 298 aaKnown RBP9.25□□□□□ -0.93
GCN1-205ENST00000548821 MAGP20916 626 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 RPA3P35244 121 aaPredicted RBP9.25□□□□□ -0.93
GCN1-205ENST00000548821 RPL22P35268 128 aaKnown RBP9.25□□□□□ -0.93
GCN1-205ENST00000548821 EIF3BP55884 814 aaKnown RBP9.25□□□□□ -0.93
GCN1-205ENST00000548821 ABATP80404 500 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 RELAQ04206 551 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 RBBP7Q16576 425 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 NDUFA9Q16795 377 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 TUBB8Q3ZCM7 444 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 GARNL3Q5VVW2 1013 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 PRAMEF13Q5VWM6 474 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 B3GNTL1Q67FW5 361 aaPredicted RBP9.25□□□□□ -0.93
GCN1-205ENST00000548821 SLC6A19Q695T7 634 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 UGT3A1Q6NUS8 523 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 CASC4Q6P4E1 433 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 NEK10Q6ZWH5 1172 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 GRK7Q8WTQ7 553 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 SMPDL3AQ92484 453 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 MIEF2Q96C03 454 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 PSMG3-AS1Q96PY0 264 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 LMF1Q96S06 567 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 KIFC1Q9BW19 673 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 NUDT9Q9BW91 350 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 LHPPQ9H008 270 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 RUBCNLQ9H714 662 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 XAB2Q9HCS7 855 aaKnown RBP9.25□□□□□ -0.93
GCN1-205ENST00000548821 SPHK1Q9NYA1 384 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 DHCR7Q9UBM7 475 aaKnown RBP9.25□□□□□ -0.93
GCN1-205ENST00000548821 ZNF282Q9UDV7 671 aaPredicted RBP9.25□□□□□ -0.93
GCN1-205ENST00000548821 CAPN6Q9Y6Q1 641 aa9.25□□□□□ -0.93
GCN1-205ENST00000548821 GOLGA6L10A0A0M3HER8 536 aa9.24□□□□□ -0.93
GCN1-205ENST00000548821 TCRBV7S2A1N4TA0A589 114 aa9.24□□□□□ -0.93
GCN1-205ENST00000548821 BLACEA4D250 179 aa9.24□□□□□ -0.93
GCN1-205ENST00000548821 CTAGE9A4FU28 777 aa9.24□□□□□ -0.93
GCN1-205ENST00000548821 FITM1A5D6W6 292 aa9.24□□□□□ -0.93
GCN1-205ENST00000548821 SDR42E2A6NKP2 422 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms