RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SYTL2Q9HCH5 934 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 NSMCE4AQ9NXX6 385 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 KLHL20Q9Y2M5 609 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 TCRBV9S1A1TA0A576 114 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 CXorf49A8MYA2 514 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 TMEM150CB9EJG8 249 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 ZBTB14O43829 449 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 NTRK1P04629 796 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 GSTA2P09210 222 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 ERGP11308 486 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 WT1P19544 449 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 OAS2P29728 719 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 PDAP1Q13442 181 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 FASTKQ14296 549 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 SF1Q15637 639 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 LRRC8EQ6NSJ5 796 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 UBE2R2Q712K3 238 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 CYS1Q717R9 158 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 GPR155Q7Z3F1 870 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 OR1L3Q8NH93 324 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 SNRNP27Q8WVK2 155 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 CHRNA10Q9GZZ6 450 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 SPTBP11277 2137 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 CHD6Q8TD26 2715 aa18.05■□□□□ 0.48
PRPF40B-206ENST00000547764 ZFYVE26Q68DK2 2539 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 LOC101059948A0A1B0GTJ6 334 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 A0A1W2PPV9 198 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 HCRTR1O43613 425 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 SCRG1O75711 98 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 SYF2O95926 243 aaKnown RBP18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 LIFP15018 202 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 MAGP20916 626 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 PSMB5P28074 263 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 GABRA4P48169 554 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 ABHD18Q0P651 414 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 ARHGAP19Q14CB8 494 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 GLE1Q53GS7 698 aaKnown RBP18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 PRAMEF17Q5VTA0 474 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 TMEM126BQ8IUX1 230 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 CEP112Q8N8E3 955 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 CDKL2Q92772 493 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 DLG3Q92796 817 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 LINGO1Q96FE5 620 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 MCMBPQ9BTE3 642 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 LRRC4CQ9HCJ2 640 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 SERTAD3Q9UJW9 196 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 RALYQ9UKM9 306 aaKnown RBP18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 ADAMTS6Q9UKP5 1117 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 NBEAQ8NFP9 2946 aa18.04■□□□□ 0.48
PRPF40B-206ENST00000547764 FAM95CA0A1B0GW59 222 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 FAM159BA6NKW6 160 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 TSPAN12O95859 305 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 SLC16A8O95907 504 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 C1QAP02745 245 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 SAT1P21673 171 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 HSD17B2P37059 387 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 STAT5AP42229 794 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 PNLIPRP1P54315 467 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 IL2P60568 153 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 DEFB110Q30KQ9 67 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 KIAA1614Q5VZ46 1190 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 MYO1HQ8N1T3 1032 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 DNAJC22Q8N4W6 341 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 OR2A1Q8NGT9 310 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 ZNF480Q8WV37 535 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 SMPDL3AQ92484 453 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 MIPEPQ99797 713 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 RHOJQ9H4E5 214 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 PCDHGA4Q9Y5G9 962 aa18.03■□□□□ 0.48
PRPF40B-206ENST00000547764 CPNE3O75131 537 aaKnown RBP18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 FKBP9O95302 570 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 MT-ND3P03897 115 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 C8GP07360 202 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 CCNYL3P0C7X3 344 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 ITGA1P56199 1179 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 TAS2R39P59534 338 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 FCRL6Q6DN72 434 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 FIGLAQ6QHK4 219 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 SUSD1Q6UWL2 747 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 TMEM207Q6UWW9 146 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 SLC38A9Q8NBW4 561 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 PPFIBP2Q8ND30 876 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 OR2L3Q8NG85 312 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 MCOLN3Q8TDD5 553 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 N4BP2L2Q92802 583 aaPredicted RBP18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 KIAA1143Q96AT1 154 aaPredicted RBP18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 VPS39Q96JC1 886 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 SLC12A9Q9BXP2 914 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 GPN2Q9H9Y4 310 aaPredicted RBP18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 INTS7Q9NVH2 962 aaKnown RBP18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 PADI1Q9ULC6 663 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 PDE10AQ9Y233 779 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 PCDHB3Q9Y5E6 796 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 MGAQ8IWI9 3026 aa18.02■□□□□ 0.48
PRPF40B-206ENST00000547764 FAM208BQ5VWN6 2430 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 LOC400499M0QZD8 3231 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 ZNF839A8K0R7 811 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 E7ENX8 843 aa18.01■□□□□ 0.47
PRPF40B-206ENST00000547764 E7EQ34 232 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms