RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CCDC77Q9BR77 488 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 DDA1Q9BW61 102 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 TXLNGYQ9BZA5 131 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 ABCF3Q9NUQ8 709 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 INTS7Q9NVH2 962 aaKnown RBP16.24■□□□□ 0.19
LTBR-215ENST00000546296 SIDT1Q9NXL6 827 aaKnown RBP16.24■□□□□ 0.19
LTBR-215ENST00000546296 ARL15Q9NXU5 204 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 CTNNAL1Q9UBT7 734 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 TLK1Q9UKI8 766 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 PCDHGA7Q9Y5G6 932 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 FRYQ5TBA9 3013 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 NPEPPSL1A6NEC2 478 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 CDRT15L2A8MXV6 281 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 C9orf172C9J069 976 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 CDC7O00311 574 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 CAPNS1P04632 268 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 SERPINB9P50453 376 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 VSNL1P62760 191 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 TUBB3Q13509 450 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 SLC29A2Q14542 456 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 IL11RAQ14626 422 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 PHKG1Q16816 387 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 ERCC6LQ2NKX8 1250 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 THEMIS2Q5TEJ8 643 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 SUSD1Q6UWL2 747 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 CMC1Q7Z7K0 106 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 CLEC14AQ86T13 490 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 FAM20CQ8IXL6 584 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 D2HGDHQ8N465 521 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 SPATA6LQ8N4H0 392 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 KDF1Q8NAX2 398 aaPredicted RBP16.23■□□□□ 0.19
LTBR-215ENST00000546296 PPFIBP2Q8ND30 876 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 FLVCR1-AS1Q8TAF5 88 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 ZNF480Q8WV37 535 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 UBLCP1Q8WVY7 318 aaPredicted RBP16.23■□□□□ 0.19
LTBR-215ENST00000546296 ANKRD7Q92527 254 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 TCTN2Q96GX1 697 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 TEFMQ96QE5 360 aaKnown RBP16.23■□□□□ 0.19
LTBR-215ENST00000546296 MIPEPQ99797 713 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 ZPBPQ9BS86 351 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 B3GNT4Q9C0J1 378 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 APMAPQ9HDC9 416 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 WDR70Q9NW82 654 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 PCDHGA3Q9Y5H0 932 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 B3GALT1Q9Y5Z6 326 aa16.23■□□□□ 0.19
LTBR-215ENST00000546296 KRT38O76015 456 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 GUCA1CO95843 209 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 ENO2P09104 434 aaPredicted RBP16.22■□□□□ 0.19
LTBR-215ENST00000546296 ERGP11308 486 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 SERPINB8P50452 374 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 AP1S2P56377 157 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 PCBP4P57723 403 aaKnown RBP16.22■□□□□ 0.19
LTBR-215ENST00000546296 ZKSCAN8Q15776 578 aaPredicted RBP16.22■□□□□ 0.19
LTBR-215ENST00000546296 LGSNQ5TDP6 509 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 FRA10AC1Q70Z53 315 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 TBC1D1Q86TI0 1168 aaPredicted RBP16.22■□□□□ 0.19
LTBR-215ENST00000546296 C19orf47Q8N9M1 422 aaKnown RBP16.22■□□□□ 0.19
LTBR-215ENST00000546296 N4BP2L2Q92802 583 aaPredicted RBP16.22■□□□□ 0.19
LTBR-215ENST00000546296 PMEPA1Q969W9 287 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 ALKBH8Q96BT7 664 aaKnown RBP16.22■□□□□ 0.19
LTBR-215ENST00000546296 ACAT2Q9BWD1 397 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 UNKQ9C0B0 810 aaKnown RBP16.22■□□□□ 0.19
LTBR-215ENST00000546296 DERL2Q9GZP9 239 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 TWSG1Q9GZX9 223 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 FANCEQ9HB96 536 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 FGF21Q9NSA1 209 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 UTP6Q9NYH9 597 aaKnown RBP16.22■□□□□ 0.19
LTBR-215ENST00000546296 FOXJ2Q9P0K8 574 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 STOX2Q9P2F5 926 aaPredicted RBP16.22■□□□□ 0.19
LTBR-215ENST00000546296 IKZF3Q9UKT9 509 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 RARRES3Q9UL19 164 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 NOVA2Q9UNW9 492 aaKnown RBP16.22■□□□□ 0.19
LTBR-215ENST00000546296 BTRCQ9Y297 605 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 KLHL20Q9Y2M5 609 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 RAXQ9Y2V3 346 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 ACOT9Q9Y305 439 aa16.22■□□□□ 0.19
LTBR-215ENST00000546296 E7ENX8 843 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 RRP8O43159 456 aaKnown RBP16.21■□□□□ 0.19
LTBR-215ENST00000546296 TLX3O43711 291 aaPredicted RBP16.21■□□□□ 0.19
LTBR-215ENST00000546296 PRICKLE3O43900 615 aaPredicted RBP16.21■□□□□ 0.19
LTBR-215ENST00000546296 FKBP9O95302 570 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 MAGP20916 626 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 CNTFP26441 200 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 PSMB5P28074 263 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 IMPA1P29218 277 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 TYK2P29597 1187 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 CMPK1P30085 196 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 ATP6V0D1P61421 351 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 TAP2Q03519 686 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 CSHL1Q14406 222 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 TSNQ15631 228 aaKnown RBP16.21■□□□□ 0.19
LTBR-215ENST00000546296 GPR19Q15760 415 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 TAF1BQ53T94 588 aaPredicted RBP16.21■□□□□ 0.19
LTBR-215ENST00000546296 AGTRAPQ6RW13 159 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 MBOAT1Q6ZNC8 495 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 ADAMTSL2Q86TH1 951 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 BPHLQ86WA6 291 aaPredicted RBP16.21■□□□□ 0.19
LTBR-215ENST00000546296 ZFAND4Q86XD8 727 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 PPP1R3BQ86XI6 285 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 DCAKDQ8WVC6 231 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms