RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 DHFR2Q86XF0 187 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 RNF148Q8N7C7 305 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 GLIS1Q8NBF1 620 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 USP29Q9HBJ7 922 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 UCKL1Q9NWZ5 548 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 MKS1Q9NXB0 559 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 HSFX1Q9UBD0 423 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 NME7Q9Y5B8 376 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 RLFQ13129 1914 aa8.42□□□□□ -1.06
CLIP1-218ENST00000545889 MYO18AQ92614 2054 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ATP6AP2A0A1C7CYW4 349 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 LCHNA4D1U4 455 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 FAM25AB3EWG3 89 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 FAM25CB3EWG5 89 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 FAM25GB3EWG6 89 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 AZIN1O14977 448 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 MUSKO15146 869 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 DCXO43602 365 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 IDH3BO43837 385 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 OR10H3O60404 316 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 RBMXL2O75526 392 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ATP6AP2O75787 350 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SAGP10523 405 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 JUNDP17535 347 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 PTGS2P35354 604 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 HSD17B2P37059 387 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 PXNP49023 591 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 PRR5P85299 388 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 HYAL2Q12891 473 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 C6orf52Q5T4I8 152 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 BROXQ5VW32 411 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SLC25A24Q6NUK1 477 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 EIF3MQ7L2H7 374 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 NUP54Q7Z3B4 507 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 NET1Q7Z628 596 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ATCAYQ86WG3 371 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ZCCHC9Q8N567 271 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 OR4E2Q8NGC2 313 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 OR10Q1Q8NGQ4 319 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 FBXO30Q8TB52 745 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ZDHHC12Q96GR4 267 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SLC38A2Q96QD8 506 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 TMEM79Q9BSE2 394 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 RHOJQ9H4E5 214 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ZNF304Q9HCX3 659 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 PDE7BQ9NP56 450 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 NINJ2Q9NZG7 142 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 AP4S1Q9Y587 144 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 UGT1A9O60656 530 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 EDF1O60869 148 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SEC24AO95486 1093 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ITGA2P17301 1181 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ATF4P18848 351 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 UGT1A6P19224 532 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 UGT1A4P22310 534 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 UGT1A3P35503 534 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 MAGEA11P43364 429 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ASMTP46597 345 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 CYP4F3Q08477 520 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 EIF4HQ15056 248 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 NEDD8Q15843 81 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 DPYSL2Q16555 572 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 TMEM240Q5SV17 173 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 PDSS1Q5T2R2 415 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 TUBA3EQ6PEY2 450 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 DEF8Q6ZN54 512 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SLC29A4Q7RTT9 530 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 PEG10Q86TG7 708 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 LDB1Q86U70 411 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 DEFB107AQ8IZN7 70 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 RBM15BQ8NDT2 890 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 TET1Q8NFU7 2136 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 MAPK15Q8TD08 544 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 AZIN2Q96A70 460 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 OXNAD1Q96HP4 312 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 MIPEPQ99797 713 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 HERPUD2Q9BSE4 406 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ZSCAN5AQ9BUG6 496 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 C1orf50Q9BV19 199 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 UGT1A7Q9HAW7 530 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 UGT1A10Q9HAW8 530 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 UGT1A8Q9HAW9 530 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ITM2CQ9NQX7 267 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 SPHK2Q9NRA0 654 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 STMN3Q9NZ72 180 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 RPS6KA6Q9UK32 745 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 PADI2Q9Y2J8 665 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 PLXNA1Q9UIW2 1896 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 KHNYNO15037 678 aaKnown RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 KIAA0355O15063 1070 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 B3GALNT1O75752 331 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 CNTN5O94779 1100 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 BCL10O95999 233 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ESR1P03372 595 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ANXA4P09525 319 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 EPCAMP16422 314 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 ITGB8P26012 769 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 RGS8P57771 180 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-218ENST00000545889 TAS2R41P59536 307 aa8.41□□□□□ -1.06
CLIP1-218ENST00000545889 TRIM25Q14258 630 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms