RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 CFAP20Q9Y6A4 193 aaKnown RBP15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 KCNE2Q9Y6J6 123 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 HEATR5BQ9P2D3 2071 aa15.52■□□□□ 0.08
PRPF40A-212ENST00000545856 LAMA1P25391 3075 aa15.52■□□□□ 0.07
PRPF40A-212ENST00000545856 NCF1BA6NI72 391 aaPredicted RBP15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 NCF1CA8MVU1 366 aaPredicted RBP15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 E2F3O00716 465 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 NCF1P14598 390 aaPredicted RBP15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 EEF1DP29692 281 aaKnown RBP15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 PKNOX1P55347 436 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 RCN2Q14257 317 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 PLCL1Q15111 1095 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 NR0B2Q15466 257 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 PTCHD3Q3KNS1 767 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 PRAMEF14Q5SWL7 426 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 DUS1LQ6P1R4 473 aaKnown RBP15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 OOSP2Q86WS3 158 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 PHF21BQ96EK2 531 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 DPYSL5Q9BPU6 564 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 GATA5Q9BWX5 397 aaPredicted RBP15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 PITHD1Q9GZP4 211 aaPredicted RBP15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 C12orf65Q9H3J6 166 aaKnown RBP15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 SRMSQ9H3Y6 488 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 ICKQ9UPZ9 632 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 USP34Q70CQ2 3546 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 MYO15AQ9UKN7 3530 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 ASCC3Q8N3C0 2202 aaKnown RBP15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 FAM186AA6NE01 2351 aa15.51■□□□□ 0.07
PRPF40A-212ENST00000545856 RHPN2P1A8MT19 583 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 GIPC1O14908 333 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 TAPBPO15533 448 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 SUPT7LO94864 414 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 OTCP00480 354 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 GNAZP19086 355 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 NAGLUP54802 743 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 TBPL1P62380 186 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 CLCQ05315 142 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 CDC16Q13042 620 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 PRKAA1Q13131 559 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 PRKG2Q13237 762 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 STX3Q13277 289 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 E2F2Q14209 437 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 CHI3L2Q15782 390 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 TBCCQ15814 346 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 CCSMST1Q4G0I0 132 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 SLC35F3Q8IY50 421 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 KYQ8NBH2 561 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 WDR48Q8TAF3 677 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 ZNF75CPQ92670 426 aaPredicted RBP15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 C7orf26Q96N11 449 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 ZNF382Q96SR6 550 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 CD180Q99467 661 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 SLC38A3Q99624 504 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 NTMT1Q9BV86 223 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 ANKMY1Q9P2S6 941 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 EPHA6Q9UF33 1036 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 HAO1Q9UJM8 370 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 ANGPTL3Q9Y5C1 460 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 PCDHB11Q9Y5F2 797 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 GVINP1Q7Z2Y8 2422 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 FRYLO94915 3013 aa15.5■□□□□ 0.07
PRPF40A-212ENST00000545856 EME2A4GXA9 379 aaPredicted RBP15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 HGSO14964 777 aaPredicted RBP15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 SNNO75324 88 aaPredicted RBP15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 CKMT1AP12532 417 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 CASP2P42575 452 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 CAPZBP47756 277 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 HSPA7P48741 367 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 ZNF33BQ06732 778 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 SQSTM1Q13501 440 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 NAE1Q13564 534 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 GTF2H2Q13888 395 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 GGTA1PQ4G0N0 100 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 UNC50Q53HI1 259 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 PRAMEF13Q5VWM6 474 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 GTF2H2CQ6P1K8 395 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 PRR23CQ6ZRP0 262 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 THOC6Q86W42 341 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 AFAP1L2Q8N4X5 818 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 GRAMD1AQ96CP6 724 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 SIKE1Q9BRV8 207 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 MECRQ9BV79 373 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 EDEM2Q9BV94 578 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 GSTO2Q9H4Y5 243 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 IL21RQ9HBE5 538 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 MLXIPLQ9NP71 852 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 PADI4Q9UM07 663 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 DYRK1BQ9Y463 629 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 KLK4Q9Y5K2 254 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 SNRNP200O75643 2136 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 OR5K3A6NET4 321 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 C2orf74A8MZ97 194 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 SLCO1B7G3V0H7 640 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 CCNT2O60583 730 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 WDR47O94967 919 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 ENO1P06733 434 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 GP1BAP07359 652 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 EBLN1P0CF75 366 aa15.49■□□□□ 0.07
PRPF40A-212ENST00000545856 BGNP21810 368 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms