RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 KLHL24Q6TFL4 600 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 DCAF4L2Q8NA75 395 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 EMID1Q96A84 441 aaPredicted RBP12.25□□□□□ -0.45
COL4A6-209ENST00000545689 RGMAQ96B86 450 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 NARS2Q96I59 477 aaKnown RBP12.25□□□□□ -0.45
COL4A6-209ENST00000545689 FEM1AQ9BSK4 669 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 FZD4Q9ULV1 537 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 ITPKBP27987 946 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 STARP49675 285 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 TUBA1BP68363 451 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 ZCCHC12Q6PEW1 402 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 TUBA1AQ71U36 451 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 IFNL1Q8IU54 200 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 ANKRA2Q9H9E1 313 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 FBXW2Q9UKT8 454 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 CICQ96RK0 1608 aaPredicted RBP12.24□□□□□ -0.45
COL4A6-209ENST00000545689 INHAP05111 366 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 FPR1P21462 350 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 MPIP34949 423 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 TOMM20Q15388 145 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 CCDC157Q569K6 752 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 STEAP4Q687X5 459 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 GDF6Q6KF10 455 aaPredicted RBP12.24□□□□□ -0.45
COL4A6-209ENST00000545689 LYSMD3Q7Z3D4 306 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 OR4C6Q8NH72 309 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 CDADC1Q9BWV3 514 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 EME2A4GXA9 379 aaPredicted RBP12.24□□□□□ -0.45
COL4A6-209ENST00000545689 UBXN7O94888 489 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 SIX3O95343 332 aaPredicted RBP12.24□□□□□ -0.45
COL4A6-209ENST00000545689 ENGP17813 658 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 TIGD6Q17RP2 521 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 ADGRG6Q86SQ4 1221 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 FLCNQ8NFG4 579 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 HBEGFQ99075 208 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 SLC35A5Q9BS91 424 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 POLR2J3Q9H1A7 115 aaKnown RBP12.24□□□□□ -0.45
COL4A6-209ENST00000545689 PRAMEF12O95522 483 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 MOGSQ13724 837 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 NADK2Q4G0N4 442 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 CXorf57Q6NSI4 855 aaKnown RBP12.24□□□□□ -0.45
COL4A6-209ENST00000545689 TPRG1Q6ZUI0 275 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 FAM124AQ86V42 546 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 SH3RF2Q8TEC5 729 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 HAVCR1Q96D42 359 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 C11orf24Q96F05 449 aaPredicted RBP12.24□□□□□ -0.45
COL4A6-209ENST00000545689 PYURFQ96I23 114 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 GMLQ99445 158 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 PKP2Q99959 881 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 CNPPD1Q9BV87 410 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 OR2AG1Q9H205 316 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 TP73O15350 636 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 ORC5O43913 435 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 GSTT2BP0CG30 244 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 CPN2P22792 545 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 LEPRP48357 1165 aaKnown RBP12.24□□□□□ -0.45
COL4A6-209ENST00000545689 NRLP54845 237 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 PRKCZQ05513 592 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 E2F2Q14209 437 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 SLBPQ14493 270 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL4A6-209ENST00000545689 SMCO1Q147U7 214 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 PRAMEF14Q5SWL7 426 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 RBM20Q5T481 1227 aaKnown RBP12.24□□□□□ -0.45
COL4A6-209ENST00000545689 PRAMEF13Q5VWM6 474 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 GOLM1Q8NBJ4 401 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 OR4F6Q8NGB9 312 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 ESAMQ96AP7 390 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 ZNF641Q96N77 438 aaPredicted RBP12.24□□□□□ -0.45
COL4A6-209ENST00000545689 RB1P06400 928 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 GIMD1P0DJR0 217 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 CHRNA6Q15825 494 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 MYLK3Q32MK0 819 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 ANO7Q6IWH7 933 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 ADGRD2Q7Z7M1 963 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 PARGQ86W56 976 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 C2orf73Q8N5S3 287 aaPredicted RBP12.24□□□□□ -0.45
COL4A6-209ENST00000545689 RHEBL1Q8TAI7 183 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 ITPAQ9BY32 194 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 SRMSQ9H3Y6 488 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 UPB1Q9UBR1 384 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 IKZF2Q9UKS7 526 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 TIAM2Q8IVF5 1701 aa12.24□□□□□ -0.45
COL4A6-209ENST00000545689 AKT2P31751 481 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 RFC2P35250 354 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 VBP1P61758 197 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 ZNF630Q2M218 657 aaPredicted RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 CNKSR3Q6P9H4 555 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 RBM23Q86U06 439 aaKnown RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 STON2Q8WXE9 905 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 MYOCQ99972 504 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 C11orf84Q9BUA3 381 aaPredicted RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 COMMD4Q9H0A8 199 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 CCSER2Q9H7U1 834 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 TM9SF3Q9HD45 589 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 C14orf105Q9NVL8 296 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 KRT33AO76009 404 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 RPL17P18621 184 aaKnown RBP12.23□□□□□ -0.45
COL4A6-209ENST00000545689 ACVRL1P37023 503 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 ACADVLP49748 655 aa12.23□□□□□ -0.45
COL4A6-209ENST00000545689 NPTX1Q15818 432 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms