RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 AMD1P17707 334 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 AOAHP28039 575 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 DLSTP36957 453 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 CDKN2DP55273 166 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 FOXK1P85037 733 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 TIAL1Q01085 375 aaKnown RBP eCLIP12.09□□□□□ -0.47
ACTN1-206ENST00000544964 MC1RQ01726 317 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 GSTM4Q03013 218 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 SRSF1Q07955 248 aaKnown RBP eCLIP12.09□□□□□ -0.47
ACTN1-206ENST00000544964 HSPA14Q0VDF9 509 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 NAB1Q13506 487 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 KLHL38Q2WGJ6 581 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 COLEC12Q5KU26 742 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 GRTP1Q5TC63 336 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 CACHD1Q5VU97 1274 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 FAM45BPQ6NSW5 357 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 C16orf46Q6P387 395 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 C6orf15Q6UXA7 325 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-206ENST00000544964 FAM92BQ6ZTR7 304 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 OTOAQ7RTW8 1153 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 VRK3Q8IV63 474 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 ZBTB2Q8N680 514 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
ACTN1-206ENST00000544964 MYRIPQ8NFW9 859 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 GIMAP7Q8NHV1 300 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 FAM45AQ8TCE6 357 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 CXorf40BQ96DE9 158 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 VPS39Q96JC1 886 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 SLC41A2Q96JW4 573 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 OLFM1Q99784 485 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 TP53TG5Q9Y2B4 290 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 FER1L5A0AVI2 2057 aa12.09□□□□□ -0.47
ACTN1-206ENST00000544964 IGHV5-51A0A0C4DH38 117 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 CLEC18AA5D8T8 446 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 KLHL33A6NCF5 533 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 K7EM74 188 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 CTIFO43310 598 aaKnown RBP12.08□□□□□ -0.48
ACTN1-206ENST00000544964 VPS26AO75436 327 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 SHBGP04278 402 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 SLC35G4P0C7Q5 338 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 NELFEP18615 380 aaKnown RBP12.08□□□□□ -0.48
ACTN1-206ENST00000544964 NR1D1P20393 614 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 FDXRP22570 491 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 SPRP35270 261 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-206ENST00000544964 MSH2P43246 934 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 CLCN7P51798 805 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 BMPR2Q13873 1038 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 KCNAB1Q14722 419 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 TMED2Q15363 201 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 IGFBP7Q16270 282 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 RPE65Q16518 533 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.08□□□□□ -0.48
ACTN1-206ENST00000544964 LACTB2Q53H82 288 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-206ENST00000544964 IRGCQ6NXR0 463 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 DUS1LQ6P1R4 473 aaKnown RBP12.08□□□□□ -0.48
ACTN1-206ENST00000544964 CLEC18BQ6UXF7 455 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 CLEC18CQ8NCF0 446 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 CD200R1Q8TD46 325 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 SLC44A1Q8WWI5 657 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 KCNJ9Q92806 393 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 INSM2Q96T92 566 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-206ENST00000544964 PAFAH2Q99487 392 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 OR52A5Q9H2C5 316 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 CAB39LQ9H9S4 337 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 LATS2Q9NRM7 1088 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 LNPEPQ9UIQ6 1025 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 TRMT6Q9UJA5 497 aaKnown RBP12.08□□□□□ -0.48
ACTN1-206ENST00000544964 ACSL5Q9ULC5 683 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 SLC39A10Q9ULF5 831 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 CORO1CQ9ULV4 474 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-206ENST00000544964 CDYLQ9Y232 598 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 VWA7Q9Y334 891 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 DHRS7Q9Y394 339 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 CFAP20Q9Y6A4 193 aaKnown RBP12.08□□□□□ -0.48
ACTN1-206ENST00000544964 ICE1Q9Y2F5 2266 aa12.08□□□□□ -0.48
ACTN1-206ENST00000544964 UNC79Q9P2D8 2635 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 HIVEP3Q5T1R4 2406 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 NBPF19A0A087WUL8 3843 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 KPNA5O15131 536 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 GPC4O75487 556 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 INHBAP08476 426 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 FOLR1P15328 257 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 GCAP28676 217 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 HALP42357 657 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 TAS2R39P59534 338 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 ABRQ12979 859 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 RPA4Q13156 261 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 PDAP1Q13442 181 aaKnown RBP12.07□□□□□ -0.48
ACTN1-206ENST00000544964 ZNF460Q14592 562 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 ACSBG2Q5FVE4 666 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 PLEKHS1Q5SXH7 462 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 PWWP2BQ6NUJ5 590 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 PPP1R3BQ86XI6 285 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 RASGRP3Q8IV61 690 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 CEP97Q8IW35 865 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 CPNE9Q8IYJ1 553 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 OR2W6PQ8NHA6 318 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 CT55Q8WUE5 264 aa12.07□□□□□ -0.48
ACTN1-206ENST00000544964 DCAKDQ8WVC6 231 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms