RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 UFM1P61960 85 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 TBPL1P62380 186 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 DOC2AQ14183 400 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 E2F2Q14209 437 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 IMPG1Q17R60 797 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 TRMT5Q32P41 509 aaKnown RBP19.23■□□□□ 0.67
COPS7A-218ENST00000543939 XKR6Q5GH73 641 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 TMEM31Q5JXX7 168 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 CAPRIN2Q6IMN6 1127 aaKnown RBP19.23■□□□□ 0.67
COPS7A-218ENST00000543939 CAPN13Q6MZZ7 669 aaPredicted RBP19.23■□□□□ 0.67
COPS7A-218ENST00000543939 DCUN1D3Q8IWE4 304 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 PHC3Q8NDX5 983 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 FLCNQ8NFG4 579 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 RAD51AP1Q96B01 352 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 MTFMTQ96DP5 389 aaKnown RBP19.23■□□□□ 0.67
COPS7A-218ENST00000543939 TEX37Q96LM6 180 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 ACPTQ9BZG2 426 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 POLMQ9NP87 494 aaPredicted RBP19.23■□□□□ 0.67
COPS7A-218ENST00000543939 NOP53Q9NZM5 478 aaKnown RBP19.23■□□□□ 0.67
COPS7A-218ENST00000543939 SUFUQ9UMX1 484 aa19.23■□□□□ 0.67
COPS7A-218ENST00000543939 CHURC1-FNTBB4DL54 471 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 E7ENX8 843 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 MRASO14807 208 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 CLGNO14967 610 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 KCNJ13O60928 360 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 SLC22A3O75751 556 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 PDE5AO76074 875 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 IGLV3-19P01714 112 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 SLC2A4P14672 509 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 IL9P15248 144 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 CAPN3P20807 821 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 KELP23276 732 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 CASP2P42575 452 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 DGKEP52429 567 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 PNLIPRP1P54315 467 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 CLDN2P57739 230 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 TAP2Q03519 686 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 IL23RQ5VWK5 629 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 FRG2Q64ET8 278 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 GRHL2Q6ISB3 625 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 HACD2Q6Y1H2 254 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 BNC2Q6ZN30 1099 aaPredicted RBP19.22■□□□□ 0.67
COPS7A-218ENST00000543939 GALNT13Q8IUC8 556 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 FBXW8Q8N3Y1 598 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 SLC45A3Q96JT2 553 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 FRG2BQ96QU4 278 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 LRTM1Q9HBL6 345 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 PCM1Q15154 2024 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 KANSL1LA0AUZ9 987 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 NPIPB8E9PQR5 432 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 IFRD1O00458 451 aaPredicted RBP19.22■□□□□ 0.67
COPS7A-218ENST00000543939 RPN2P04844 631 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 SLC35G4P0C7Q5 338 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 G6PDP11413 515 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 GNAZP19086 355 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 HNRNPA2B1P22626 353 aaKnown RBP19.22■□□□□ 0.67
COPS7A-218ENST00000543939 HNF4AP41235 474 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 DPP6P42658 865 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 CLCNKAP51800 687 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 NEK2P51955 445 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 RPL38P63173 70 aaKnown RBP19.22■□□□□ 0.67
COPS7A-218ENST00000543939 TFF2Q03403 129 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 ZNF33BQ06732 778 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 MAD2L1Q13257 205 aaPredicted RBP19.22■□□□□ 0.67
COPS7A-218ENST00000543939 RCAN2Q14206 197 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 C6orf163Q5TEZ5 329 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 CYP20A1Q6UW02 462 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 SYT13Q7L8C5 426 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 RETREG3Q86VR2 466 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 ZFAND4Q86XD8 727 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 EFCAB3Q8N7B9 438 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 OR5K2Q8NHB8 316 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 PROKR1Q8TCW9 393 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 GUCD1Q96NT3 240 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 CDRT15Q96T59 188 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 MRPL40Q9NQ50 206 aaKnown RBP19.22■□□□□ 0.67
COPS7A-218ENST00000543939 C1orf109Q9NX04 203 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 ASIC5Q9NY37 505 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 CA14Q9ULX7 337 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 NDUFAF1Q9Y375 327 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 POLR3HQ9Y535 204 aaPredicted RBP19.22■□□□□ 0.67
COPS7A-218ENST00000543939 PCDHGA7Q9Y5G6 932 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 KCNE2Q9Y6J6 123 aa19.22■□□□□ 0.67
COPS7A-218ENST00000543939 C9JVG2 144 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 FPGTO14772 594 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 ANKRD28O15084 1053 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 LATO43561 262 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 RSL1D1O76021 490 aaKnown RBP19.21■□□□□ 0.67
COPS7A-218ENST00000543939 NPPBP16860 134 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 PRPH2P23942 346 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 IL12AP29459 219 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 PRKCQQ04759 706 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 VPS26BQ4G0F5 336 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 C8orf82Q6P1X6 216 aaPredicted RBP19.21■□□□□ 0.67
COPS7A-218ENST00000543939 SLCO4C1Q6ZQN7 724 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 RIPOR1Q6ZS17 1223 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 SYNPOQ8N3V7 929 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 WDR20Q8TBZ3 569 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 NEIL2Q969S2 332 aa19.21■□□□□ 0.67
COPS7A-218ENST00000543939 BMFQ96LC9 184 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms