RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 KCNN3Q9UGI6 736 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 PCYOX1Q9UHG3 505 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 SLC24A2Q9UI40 661 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 POMT2Q9UKY4 750 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 TMPRSS11EQ9UL52 423 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 RRP15Q9Y3B9 282 aaKnown RBP9.37□□□□□ -0.91
CHFR-220ENST00000541817 H3BMH7 237 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 SMAD7O15105 426 aaKnown RBP9.36□□□□□ -0.91
CHFR-220ENST00000541817 CTAG2O75638 210 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 TOXO94900 526 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 PRLP01236 227 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 KRT14P02533 472 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 HOXD4P09016 255 aaPredicted RBP9.36□□□□□ -0.91
CHFR-220ENST00000541817 MTHFD1P11586 935 aaKnown RBP9.36□□□□□ -0.91
CHFR-220ENST00000541817 ABOP16442 354 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 ITGAXP20702 1163 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 MSX1P28360 303 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 PRDX3P30048 256 aaKnown RBP9.36□□□□□ -0.91
CHFR-220ENST00000541817 ECHS1P30084 290 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 COILP38432 576 aaPredicted RBP9.36□□□□□ -0.91
CHFR-220ENST00000541817 MMP13P45452 471 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 NSFP46459 744 aaKnown RBP9.36□□□□□ -0.91
CHFR-220ENST00000541817 YBX1P67809 324 aaKnown RBP9.36□□□□□ -0.91
CHFR-220ENST00000541817 RBBP7Q16576 425 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 ODF2Q5BJF6 829 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 TMC3Q7Z5M5 1100 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 TRIM73Q86UV7 250 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 HOOK3Q86VS8 718 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 SLC13A5Q86YT5 568 aaPredicted RBP9.36□□□□□ -0.91
CHFR-220ENST00000541817 MCOLN2Q8IZK6 566 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 BCAS4Q8TDM0 211 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 NAT14Q8WUY8 206 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 KRT35Q92764 455 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 HAS2Q92819 552 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 RMND5BQ96G75 393 aaPredicted RBP9.36□□□□□ -0.91
CHFR-220ENST00000541817 C12orf66Q96MD2 445 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 GPR137Q96N19 417 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 WWP1Q9H0M0 922 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 TXLNGQ9NUQ3 528 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 IRAK4Q9NWZ3 460 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 FEZ2Q9UHY8 353 aaPredicted RBP9.36□□□□□ -0.91
CHFR-220ENST00000541817 AP4E1Q9UPM8 1137 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 SNX24Q9Y343 169 aa9.36□□□□□ -0.91
CHFR-220ENST00000541817 MYO1FO00160 1098 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 BTN3A3O00478 584 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 BTN3A1O00481 513 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 MAFKO60675 156 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 POP7O75817 140 aaKnown RBP9.35□□□□□ -0.91
CHFR-220ENST00000541817 PRAMEF1O95521 474 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 PIRTP0C851 137 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 HLA-DPA1P20036 260 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 SPAM1P38567 509 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 MDH1P40925 334 aaKnown RBP9.35□□□□□ -0.91
CHFR-220ENST00000541817 FNTAP49354 379 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 PRKAA1Q13131 559 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 CALCOCO2Q13137 446 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 SLMAPQ14BN4 828 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 PPP1R7Q15435 360 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 UAP1Q16222 522 aaPredicted RBP9.35□□□□□ -0.91
CHFR-220ENST00000541817 NKG7Q16617 165 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 CYP1B1Q16678 543 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 KRT71Q3SY84 523 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 PPP6R3Q5H9R7 873 aaPredicted RBP9.35□□□□□ -0.91
CHFR-220ENST00000541817 SMYD5Q6GMV2 418 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 CCDC137Q6PK04 289 aaKnown RBP9.35□□□□□ -0.91
CHFR-220ENST00000541817 RFX8Q6ZV50 586 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 SYDE1Q6ZW31 735 aaPredicted RBP9.35□□□□□ -0.91
CHFR-220ENST00000541817 MICALCLQ6ZW33 695 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 KRTAP1-3Q8IUG1 177 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 CCDC71Q8IV32 467 aaPredicted RBP9.35□□□□□ -0.91
CHFR-220ENST00000541817 PRSS58Q8IYP2 241 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 VWA5B2Q8N398 1253 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 MARVELD2Q8N4S9 558 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 GDAP1Q8TB36 358 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 CCDC110Q8TBZ0 833 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 GRK7Q8WTQ7 553 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 TEKT4Q8WW24 435 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 ZFPM2Q8WW38 1151 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 ZNF599Q96NL3 588 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 HES7Q9BYE0 225 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 SYTL2Q9HCH5 934 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 MRPL47Q9HD33 250 aaKnown RBP9.35□□□□□ -0.91
CHFR-220ENST00000541817 HOMER3Q9NSC5 361 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 ETNK2Q9NVF9 386 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 PCSK1NQ9UHG2 260 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 LCMT1Q9UIC8 334 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 ANAPC7Q9UJX3 599 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 SHOC2Q9UQ13 582 aa9.35□□□□□ -0.91
CHFR-220ENST00000541817 HRNRQ86YZ3 2850 aaPredicted RBP9.35□□□□□ -0.91
CHFR-220ENST00000541817 CPAMD8Q8IZJ3 1885 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 E9PLN8 166 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 NDUFAB1O14561 156 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 LSM8O95777 96 aaKnown RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 CYP1A1P04798 512 aaPredicted RBP9.34□□□□□ -0.91
CHFR-220ENST00000541817 CD63P08962 238 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 PRR35P0CG20 571 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 VCLP18206 1134 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 MMP8P22894 467 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 HOXC12P31275 282 aa9.34□□□□□ -0.91
CHFR-220ENST00000541817 SOX11P35716 441 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms