RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 ARHGEF3Q9NR81 526 aa9.32□□□□□ -0.92
TTC39C-203ENST00000540918 KLHL28Q9NXS3 571 aa9.32□□□□□ -0.92
TTC39C-203ENST00000540918 FNIP2Q9P278 1114 aa9.32□□□□□ -0.92
TTC39C-203ENST00000540918 C5AR2Q9P296 337 aa9.32□□□□□ -0.92
TTC39C-203ENST00000540918 PCDHGA11Q9Y5H2 935 aa9.32□□□□□ -0.92
TTC39C-203ENST00000540918 RP1P56715 2156 aa9.32□□□□□ -0.92
TTC39C-203ENST00000540918 ANXA6P08133 673 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 CCR2P41597 374 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 CTSCP53634 463 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 SPIBQ01892 262 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 SLC5A9Q2M3M2 681 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 LILRA3Q8N6C8 439 aaPredicted RBP9.31□□□□□ -0.92
TTC39C-203ENST00000540918 CNPPD1Q9BV87 410 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 DERL2Q9GZP9 239 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 MAT2BQ9NZL9 334 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 VPS29Q9UBQ0 182 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 BLOC1S6Q9UL45 172 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 TESMINQ9Y4I5 508 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 DNAJC15Q9Y5T4 150 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 NUP214P35658 2090 aaPredicted RBP9.31□□□□□ -0.92
TTC39C-203ENST00000540918 RREB1Q92766 1687 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 DRGXA6NNA5 263 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 NDUFS4O43181 175 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 OR10H3O60404 316 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 PAPSS2O95340 614 aaPredicted RBP9.31□□□□□ -0.92
TTC39C-203ENST00000540918 DDX6P26196 483 aaKnown RBP eCLIP9.31□□□□□ -0.92
TTC39C-203ENST00000540918 ACRV1P26436 265 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 ABRAXAS2Q15018 415 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 PRAMEF13Q5VWM6 474 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 EGFLAMQ63HQ2 1017 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 CLVS1Q8IUQ0 354 aaPredicted RBP9.31□□□□□ -0.92
TTC39C-203ENST00000540918 SMYD1Q8NB12 490 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 OR9Q1Q8NGQ5 310 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 SKA1Q96BD8 255 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 SLC30A3Q99726 388 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 FAIM2Q9BWQ8 316 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 GTPBP2Q9BX10 602 aaKnown RBP9.31□□□□□ -0.92
TTC39C-203ENST00000540918 WBP1LQ9NX94 342 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 GMEB2Q9UKD1 530 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 CORO1CQ9ULV4 474 aaPredicted RBP9.31□□□□□ -0.92
TTC39C-203ENST00000540918 CACNA1GO43497 2377 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 G3V2L1 256 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 PI15O43692 258 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 SLC16A8O95907 504 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 IFNA14P01570 189 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 CYP17A1P05093 508 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 HNRNPA1P09651 372 aaKnown RBP eCLIP9.31□□□□□ -0.92
TTC39C-203ENST00000540918 PDHA2P29803 388 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 RGS1Q08116 209 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 STX4Q12846 297 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 EPS8Q12929 822 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 PDK3Q15120 406 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 USP53Q70EK8 1073 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 FRMD1Q8N878 549 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 TERB1Q8NA31 727 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 PHF10Q8WUB8 498 aaKnown RBP9.31□□□□□ -0.92
TTC39C-203ENST00000540918 GLMNQ92990 594 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 QRFPRQ96P65 431 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 C17orf62Q9BQA9 187 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 MRPS30Q9NP92 439 aaKnown RBP9.31□□□□□ -0.92
TTC39C-203ENST00000540918 STOX2Q9P2F5 926 aaPredicted RBP9.31□□□□□ -0.92
TTC39C-203ENST00000540918 ZNF780BQ9Y6R6 833 aa9.31□□□□□ -0.92
TTC39C-203ENST00000540918 TUBGCP6Q96RT7 1819 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 SDHDO14521 159 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 FAM20BO75063 409 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 SOCS5O75159 536 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 CLIC3O95833 236 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 RB1P06400 928 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 ATP6V1C1P21283 382 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 FEN1P39748 380 aaKnown RBP9.3□□□□□ -0.92
TTC39C-203ENST00000540918 MTHFRP42898 656 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 AQP4P55087 323 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 ERVK-8P63133 956 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 ZXDBP98169 803 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 TRIM25Q14258 630 aaKnown RBP9.3□□□□□ -0.92
TTC39C-203ENST00000540918 STEAP4Q687X5 459 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 ZFP1Q6P2D0 407 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 BEND5Q7L4P6 421 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 SPATA19Q7Z5L4 167 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 ADCK1Q86TW2 530 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 IL21RQ9HBE5 538 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 RPS6KB2Q9UBS0 482 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 CASP8AP2Q9UKL3 1982 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 ELOVL7A1L3X0 281 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 DYRK3O43781 588 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 OAS1P00973 400 aaKnown RBP9.3□□□□□ -0.92
TTC39C-203ENST00000540918 ATXN1LP0C7T5 689 aaKnown RBP9.3□□□□□ -0.92
TTC39C-203ENST00000540918 KRT20P35900 424 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 HK2P52789 917 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 TAS2R50P59544 299 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 GANABQ14697 944 aaKnown RBP9.3□□□□□ -0.92
TTC39C-203ENST00000540918 CST6Q15828 149 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 C6orf136Q5SQH8 315 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 PDE12Q6L8Q7 609 aaKnown RBP9.3□□□□□ -0.92
TTC39C-203ENST00000540918 TRIM40Q6P9F5 258 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 C6orf89Q6UWU4 347 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 ANKRD33Q7Z3H0 272 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 ADGRD2Q7Z7M1 963 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 STX19Q8N4C7 294 aa9.3□□□□□ -0.92
TTC39C-203ENST00000540918 CAMKK1Q8N5S9 505 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms