RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 MAP7D1Q3KQU3 841 aa11.9□□□□□ -0.5
AP003559.1-201ENST00000540906 CATSPEREQ5SY80 951 aa11.9□□□□□ -0.5
AP003559.1-201ENST00000540906 PTCRAQ6ISU1 281 aaPredicted RBP11.9□□□□□ -0.5
AP003559.1-201ENST00000540906 TTC23LQ6PF05 361 aa11.9□□□□□ -0.5
AP003559.1-201ENST00000540906 BLOC1S3Q6QNY0 202 aa11.9□□□□□ -0.5
AP003559.1-201ENST00000540906 OR9A1PQ8NGU1 263 aa11.9□□□□□ -0.5
AP003559.1-201ENST00000540906 PROKR1Q8TCW9 393 aa11.9□□□□□ -0.5
AP003559.1-201ENST00000540906 VPS33AQ96AX1 596 aa11.9□□□□□ -0.5
AP003559.1-201ENST00000540906 BMFQ96LC9 184 aa11.9□□□□□ -0.5
AP003559.1-201ENST00000540906 CDRT15Q96T59 188 aa11.9□□□□□ -0.5
AP003559.1-201ENST00000540906 UHRF1Q96T88 793 aaPredicted RBP11.9□□□□□ -0.5
AP003559.1-201ENST00000540906 EFCAB1Q9HAE3 211 aa11.9□□□□□ -0.5
AP003559.1-201ENST00000540906 E7ENX8 843 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 KMOO15229 486 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 ACADMP11310 421 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 SLC2A4P14672 509 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 CLCNKAP51800 687 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 MTTPP55157 894 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 PSME3P61289 254 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 IRF8Q02556 426 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 TAP2Q03519 686 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 FZD5Q13467 585 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 CCNIQ14094 377 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 KIAA0040Q15053 153 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 PDCD4Q53EL6 469 aaKnown RBP11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 PYCR3Q53H96 274 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 XKR6Q5GH73 641 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 C8orf82Q6P1X6 216 aaPredicted RBP11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 RNF165Q6ZSG1 346 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 KBTBD6Q86V97 674 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 PGAM4Q8N0Y7 254 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 SELENOMQ8WWX9 145 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 TFGQ92734 400 aaPredicted RBP11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 NEIL2Q969S2 332 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 PDXPQ96GD0 296 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 INSM2Q96T92 566 aaPredicted RBP11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 MENTQ9BUN1 341 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 SGPP1Q9BX95 441 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 TRIM8Q9BZR9 551 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 BTBD1Q9H0C5 482 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 SPNS1Q9H2V7 528 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 SCML1Q9UN30 329 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 ASF1AQ9Y294 204 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 NCKAP1Q9Y2A7 1128 aa11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 TDRKHQ9Y2W6 561 aaKnown RBP11.89□□□□□ -0.51
AP003559.1-201ENST00000540906 KRBA1A5PL33 1030 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 FXYD1O00168 92 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 SLC28A1O00337 649 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 CLGNO14967 610 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 JUPP14923 745 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 NPPBP16860 134 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 XRCC1P18887 633 aaPredicted RBP11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 GNPDA1P46926 289 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 ART3Q13508 389 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 PTGR1Q14914 329 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 SF1Q15637 639 aaKnown RBP11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 ZNF423Q2M1K9 1284 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 LEXMQ3ZCV2 418 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 FBXO43Q4G163 708 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 PIGGQ5H8A4 983 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 PAGE3Q5JUK9 113 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 CYP20A1Q6UW02 462 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 C16orf89Q6UX73 402 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 GCNT7Q6ZNI0 430 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 NET1Q7Z628 596 aaPredicted RBP11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 SYTL1Q8IYJ3 562 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 FBXW8Q8N3Y1 598 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 FAM156AQ8NDB6 213 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 CLHC1Q8NHS4 586 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 WDR20Q8TBZ3 569 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 ATL1Q8WXF7 558 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 OR1E3Q8WZA6 343 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 APIPQ96GX9 242 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 CCT7Q99832 543 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 SLC25A23Q9BV35 468 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 C6orf106Q9H6K1 298 aaPredicted RBP11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 IL1RL2Q9HB29 575 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 LRTM1Q9HBL6 345 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 ITM2CQ9NQX7 267 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 MOSPD1Q9UJG1 213 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 POMPQ9Y244 141 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 DLGAP4Q9Y2H0 992 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 SLCO1B1Q9Y6L6 691 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 RGS14O43566 566 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 SH3BGRLO75368 114 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 SLC22A3O75751 556 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 ETHE1O95571 254 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 EML2O95834 649 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 KRT6AP02538 564 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 KRT6BP04259 564 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 KRT6CP48668 564 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 PNLIPRP1P54315 467 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 ACTR3P61158 418 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 MS4A2Q01362 244 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 MEF2AQ02078 507 aaPredicted RBP11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 RPA4Q13156 261 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 STX5Q13190 355 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 CLCA4Q14CN2 919 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 RPS6KA2Q15349 733 aa11.88□□□□□ -0.51
AP003559.1-201ENST00000540906 MAPRE2Q15555 327 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms