RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 E9PBE3 544 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 PIP5K1BO14986 540 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 AXIN1O15169 862 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 KLHL41O60662 606 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 LRP3O75074 770 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 VPS4BO75351 444 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 CAPN1P07384 714 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 ERGP11308 486 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 HGFP14210 728 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 CD27P26842 260 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 RPL10P27635 214 aaKnown RBP13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 CNR2P34972 360 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 ARL1P40616 181 aaPredicted RBP13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 SCTRP47872 440 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 PXNP49023 591 aaPredicted RBP13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 SRP54P61011 504 aaKnown RBP13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 PCDH1Q08174 1060 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 NAE1Q13564 534 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 GRB7Q14451 532 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 SLC36A4Q6YBV0 504 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 THOC6Q86W42 341 aaKnown RBP13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 TBC1D21Q8IYX1 336 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 SLC22A18ASQ8N1D0 253 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 CDYL2Q8N8U2 506 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 OR5AR1Q8NGP9 310 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 METTL6Q8TCB7 284 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 PYCR2Q96C36 320 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 SPACA7Q96KW9 195 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 SLC29A3Q9BZD2 475 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 MRGBPQ9NV56 204 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 TRNAU1APQ9NX07 287 aaKnown RBP13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 SPATA7Q9P0W8 599 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 CDV3Q9UKY7 258 aaKnown RBP13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 WDR37Q9Y2I8 494 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 PLEKHM1Q9Y4G2 1056 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 TIMM22Q9Y584 194 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 DGKBQ9Y6T7 804 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 LAMA1P25391 3075 aa13.82□□□□□ -0.2
CYB561A3-216ENST00000540755 UGDHO60701 494 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 CLDN9O95484 217 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 THEGLP0DJG4 465 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 ITPKAP23677 461 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 HMOX2P30519 316 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 HSD17B2P37059 387 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 CACNA1BQ00975 2339 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 CTBSQ01459 385 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 ARHGAP19Q14CB8 494 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 ALG11Q2TAA5 492 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 UAP1L1Q3KQV9 507 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 XKR7Q5GH72 579 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 NXNQ6DKJ4 435 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 CAPN13Q6MZZ7 669 aaPredicted RBP13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 WASH2PQ6VEQ5 465 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 CHSY3Q70JA7 882 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 LARP4Q71RC2 724 aaKnown RBP eCLIP13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 DDIASQ8IXT1 998 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 LRRC56Q8IYG6 542 aaPredicted RBP13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 RGL4Q8IZJ4 473 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 CPSF7Q8N684 471 aaKnown RBP13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 DCBLD1Q8N8Z6 715 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 L3MBTL4Q8NA19 623 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 SNX19Q92543 992 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 TSACCQ96A04 125 aaPredicted RBP13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 C3orf30Q96M34 536 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 C12orf66Q96MD2 445 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 INSM2Q96T92 566 aaPredicted RBP13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 ZNF385DQ9H6B1 395 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 WASH6PQ9NQA3 447 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 SEMA4GQ9NTN9 838 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 INTS7Q9NVH2 962 aaKnown RBP13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 GPRC5BQ9NZH0 403 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 ARMCX1Q9P291 453 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 PNMA8BQ9ULN7 279 aaPredicted RBP13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 PCM1Q15154 2024 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 RALGAPA1Q6GYQ0 2036 aa13.81□□□□□ -0.2
CYB561A3-216ENST00000540755 CEP295Q9C0D2 2601 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 SPTY2D1-AS1A0A0U1RR47 76 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 E7ENX8 843 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 SLC22A2O15244 555 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 UNC5CO95185 931 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 TNFP01375 233 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 NCF2P19878 526 aaPredicted RBP13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 CCND1P24385 295 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 ADSLP30566 484 aaPredicted RBP13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 PNLIPRP1P54315 467 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 TAP2Q03519 686 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 UBAP2LQ14157 1087 aaKnown RBP13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 CSRP2Q16527 193 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 USP39Q53GS9 565 aaKnown RBP13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 FAM219BQ5XKK7 198 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 ABRAXAS1Q6UWZ7 409 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 PRR23CQ6ZRP0 262 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 DCP2Q8IU60 420 aaKnown RBP13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 SYTL1Q8IYJ3 562 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 PPFIBP2Q8ND30 876 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 PHC3Q8NDX5 983 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 GAB3Q8WWW8 586 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 MED8Q96G25 268 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 KLHDC7BQ96G42 594 aa13.8□□□□□ -0.2
CYB561A3-216ENST00000540755 SLC6A18Q96N87 628 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms