RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MAPRE2Q15555 327 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 DNAL1Q4LDG9 190 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 GALNT13Q8IUC8 556 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 PGBD3Q8N328 593 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 L3MBTL4Q8NA19 623 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 OR9A1PQ8NGU1 263 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 OR56A3Q8NH54 315 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 ZDHHC5Q9C0B5 715 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 MMADHCQ9H3L0 296 aaPredicted RBP16.4■□□□□ 0.22
COPS3-212ENST00000539941 ACTR8Q9H981 624 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 FZD3Q9NPG1 666 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 EBF1Q9UH73 591 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 KANSL1LA0AUZ9 987 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 IFRD1O00458 451 aaPredicted RBP16.4■□□□□ 0.22
COPS3-212ENST00000539941 SLC16A8O95907 504 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 ACADVLP49748 655 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 CCR5P51681 352 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 MAP7Q14244 749 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 MYBPC3Q14896 1274 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 CCDC6Q16204 474 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 IL27RAQ6UWB1 636 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 RINLQ6ZS11 566 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 THOC6Q86W42 341 aaKnown RBP16.4■□□□□ 0.22
COPS3-212ENST00000539941 DCUN1D3Q8IWE4 304 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 DCBLD1Q8N8Z6 715 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 FAM13CQ8NE31 585 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 RTKNQ9BST9 563 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 ATG10Q9H0Y0 220 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 CD93Q9NPY3 652 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 NDUFA13Q9P0J0 144 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 NKX1-2Q9UD57 310 aaPredicted RBP16.4■□□□□ 0.22
COPS3-212ENST00000539941 G3BP2Q9UN86 482 aaKnown RBP16.4■□□□□ 0.22
COPS3-212ENST00000539941 SLC22A14Q9Y267 594 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 RNF11Q9Y3C5 154 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 PTGDR2Q9Y5Y4 395 aa16.4■□□□□ 0.22
COPS3-212ENST00000539941 KRT6AP02538 564 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 KRT6BP04259 564 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 IDO1P14902 403 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 GSTT1P30711 240 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 AKT2P31751 481 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 NUDT1P36639 197 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 CPA2P48052 419 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 KRT6CP48668 564 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 GRIK2Q13002 908 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 TMED1Q13445 227 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 NAE1Q13564 534 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 CYLC2Q14093 348 aaPredicted RBP16.39■□□□□ 0.21
COPS3-212ENST00000539941 PTK2BQ14289 1009 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 NFATC4Q14934 902 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 SMU1Q2TAY7 513 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 CCSMST1Q4G0I0 132 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 PYCR3Q53H96 274 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 C1QTNF12Q5T7M4 302 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 ARHGAP24Q8N264 748 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 RBM15BQ8NDT2 890 aaKnown RBP16.39■□□□□ 0.21
COPS3-212ENST00000539941 FLCNQ8NFG4 579 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 TSTD1Q8NFU3 115 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 RAD51AP1Q96B01 352 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 MARK4Q96L34 752 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 MIPEPQ99797 713 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 GPRC5BQ9NZH0 403 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 FBXL21Q9UKT6 434 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 ASF1AQ9Y294 204 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 HS3ST3A1Q9Y663 406 aa16.39■□□□□ 0.21
COPS3-212ENST00000539941 PRR19A6NJB7 356 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 PRR33A8MZF0 331 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 PSMD12O00232 456 aaPredicted RBP16.38■□□□□ 0.21
COPS3-212ENST00000539941 SLC28A1O00337 649 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 GSC2O15499 205 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 ULK1O75385 1050 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 APBB3O95704 486 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 ALDOCP09972 364 aaKnown RBP16.38■□□□□ 0.21
COPS3-212ENST00000539941 SLC35G4P0C7Q5 338 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 ITPKAP23677 461 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 YPEL5P62699 121 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 ZNF33BQ06732 778 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 FZD5Q13467 585 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 UBXN2BQ14CS0 331 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 ATP6AP1LQ52LC2 224 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 TCHHL1Q5QJ38 904 aaPredicted RBP16.38■□□□□ 0.21
COPS3-212ENST00000539941 LIPJQ5W064 366 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 FAM219BQ5XKK7 198 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 TRIM46Q7Z4K8 759 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 POU5F2Q8N7G0 328 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 ZNF480Q8WV37 535 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 TFGQ92734 400 aaPredicted RBP16.38■□□□□ 0.21
COPS3-212ENST00000539941 EDAQ92838 391 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 USP7Q93009 1102 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 UTP4Q969X6 686 aaKnown RBP16.38■□□□□ 0.21
COPS3-212ENST00000539941 PYCR2Q96C36 320 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 CADM1Q9BY67 442 aaKnown RBP16.38■□□□□ 0.21
COPS3-212ENST00000539941 TM7SF3Q9NS93 570 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 TMEM45AQ9NWC5 275 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 SNX6Q9UNH7 406 aa16.38■□□□□ 0.21
COPS3-212ENST00000539941 KCNE1BA0A087WTH5 132 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 KRBA1A5PL33 1030 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 POM121BA6NF01 834 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 MANBAO00462 879 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 RGS14O43566 566 aa16.37■□□□□ 0.21
COPS3-212ENST00000539941 ZNF217O75362 1048 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms