RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 C2orf54Q08AI8 447 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 WHAMMP3Q1A5X7 153 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 DNAJC21Q5F1R6 531 aaKnown RBP14.42□□□□□ -0.1
USB1-203ENST00000539737 ZNF385CQ66K41 422 aaPredicted RBP14.42□□□□□ -0.1
USB1-203ENST00000539737 KIAA0930Q6ICG6 404 aaPredicted RBP14.42□□□□□ -0.1
USB1-203ENST00000539737 CDHR3Q6ZTQ4 885 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 BPHLQ86WA6 291 aaPredicted RBP14.42□□□□□ -0.1
USB1-203ENST00000539737 KMT5CQ86Y97 462 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 CFAP206Q8IYR0 622 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 IQCKQ8N0W5 287 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 LMNTD1Q8N9Z9 388 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 BBOF1Q8ND07 529 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 HM13Q8TCT9 377 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 SEC14L1Q92503 715 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 ZNF592Q92610 1267 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 LINC00615Q96LM1 132 aaPredicted RBP14.42□□□□□ -0.1
USB1-203ENST00000539737 UNKQ9C0B0 810 aaKnown RBP14.42□□□□□ -0.1
USB1-203ENST00000539737 SPRTNQ9H040 489 aaPredicted RBP14.42□□□□□ -0.1
USB1-203ENST00000539737 ZNF552Q9H707 407 aaPredicted RBP14.42□□□□□ -0.1
USB1-203ENST00000539737 KIR3DX1Q9H7L2 352 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 FAM60AQ9NP50 221 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 CATSPERZQ9NTU4 200 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 ANAPC5Q9UJX4 755 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 CDYLQ9Y232 598 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 F8P00451 2351 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 ZGRF1Q86YA3 2104 aa14.42□□□□□ -0.1
USB1-203ENST00000539737 DOCK10Q96BY6 2186 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 FAM237BA0A1B0GVD1 139 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 EFCAB8A8MWE9 144 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 KLF7O75840 302 aaPredicted RBP14.41□□□□□ -0.1
USB1-203ENST00000539737 SEC31AO94979 1220 aaKnown RBP14.41□□□□□ -0.1
USB1-203ENST00000539737 RAB40ALP0C0E4 278 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 PRSS56P0CW18 603 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 IVDP26440 423 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 NMBRP28336 390 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 TTPAP49638 278 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 CDKN1CP49918 316 aaPredicted RBP14.41□□□□□ -0.1
USB1-203ENST00000539737 HIF1AQ16665 826 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 CRB2Q5IJ48 1285 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 TICAM1Q8IUC6 712 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 FAM20CQ8IXL6 584 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 MFSD3Q96ES6 412 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 MESP1Q9BRJ9 268 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 ILKAPQ9H0C8 392 aaPredicted RBP14.41□□□□□ -0.1
USB1-203ENST00000539737 FANCEQ9HB96 536 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 B3GNT3Q9Y2A9 372 aa14.41□□□□□ -0.1
USB1-203ENST00000539737 PTRH2Q9Y3E5 179 aaKnown RBP14.41□□□□□ -0.1
USB1-203ENST00000539737 ADGRG4Q8IZF6 3080 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 C17orf113A0A1B0GUU1 675 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 MATN2O00339 956 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 PFDN6O15212 129 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 CD3EAPO15446 510 aaKnown RBP14.4□□□□□ -0.1
USB1-203ENST00000539737 FTH1P02794 183 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 PRDX3P30048 256 aaKnown RBP14.4□□□□□ -0.1
USB1-203ENST00000539737 PRKG2Q13237 762 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 ZIC1Q15915 447 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 VWA5B1Q5TIE3 1220 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 MRNIPQ6NTE8 343 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 HIBCHQ6NVY1 386 aaPredicted RBP14.4□□□□□ -0.1
USB1-203ENST00000539737 MED25Q71SY5 747 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 PPP1R32Q7Z5V6 425 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 PDIK1LQ8N165 341 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 CARFQ8N187 725 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 OTUD6BQ8N6M0 293 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 AMER2Q8N7J2 671 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 TMEM102Q8N9M5 508 aaPredicted RBP14.4□□□□□ -0.1
USB1-203ENST00000539737 ZNF669Q96BR6 464 aaPredicted RBP14.4□□□□□ -0.1
USB1-203ENST00000539737 LRFN5Q96NI6 719 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 TRAPPC9Q96Q05 1148 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 FERD3LQ96RJ6 166 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 NAT9Q9BTE0 207 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 HGH1Q9BTY7 390 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 TRIM31Q9BZY9 425 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 SLC7A5P2Q9GIP4 190 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 DHCR7Q9UBM7 475 aaKnown RBP14.4□□□□□ -0.1
USB1-203ENST00000539737 PCDHGA10Q9Y5H3 936 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 COPG1Q9Y678 874 aaKnown RBP14.4□□□□□ -0.1
USB1-203ENST00000539737 MAD1L1Q9Y6D9 718 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 PDZD2O15018 2839 aa14.4□□□□□ -0.1
USB1-203ENST00000539737 CELSR1Q9NYQ6 3014 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 E2F3O00716 465 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 LRRTM2O43300 516 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 RAD51CO43502 376 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 USP1O94782 785 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 VAPBO95292 243 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 OR56A5P0C7T3 313 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 PGAM1P18669 254 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 PDHA2P29803 388 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 ITGA8P53708 1063 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 ANKRD20A4Q4UJ75 823 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 RNF187Q5TA31 235 aaPredicted RBP14.39□□□□□ -0.11
USB1-203ENST00000539737 CES3Q6UWW8 571 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 GALNT16Q8N428 558 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 DTWD1Q8N5C7 304 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 MNS1Q8NEH6 495 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 OR52E1Q8NGJ3 308 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 OR8K5Q8NH50 307 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 KIF18AQ8NI77 898 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 LCN9Q8WX39 176 aa14.39□□□□□ -0.11
USB1-203ENST00000539737 MARVELD3Q96A59 401 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms