RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PTPN6P29350 595 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 TGFBR1P36897 503 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 HALP42357 657 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 MAP2K4P45985 399 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 TRIM46Q7Z4K8 759 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 CYP4Z1Q86W10 505 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 CHPFQ8IZ52 775 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 OVCA2Q8WZ82 227 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 CPPED1Q9BRF8 314 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-210ENST00000539599 UGT2B28Q9BY64 529 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 ATP13A3Q9H7F0 1226 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 GORASP2Q9H8Y8 452 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 DNAJB9Q9UBS3 223 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 BTBD3Q9Y2F9 522 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 ZNF451Q9Y4E5 1061 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 SPTBN5Q9NRC6 3674 aaKnown RBP13.69□□□□□ -0.22
UBE3B-210ENST00000539599 SLC28A1O00337 649 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 TEX28O15482 410 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 NPPAP01160 153 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 ANXA5P08758 320 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 C1SP09871 688 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 CD22P20273 847 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 S100A3P33764 101 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 NAA20P61599 178 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 DEFB103AP81534 67 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 ATP1A4Q13733 1029 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 C6orf141Q5SZD1 244 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 MACC1Q6ZN28 852 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 RNF168Q8IYW5 571 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-210ENST00000539599 OR2AP1Q8NGE2 309 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 FNDC8Q8TC99 324 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 TMEM169Q96HH4 297 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 COPS8Q99627 209 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 NTMT1Q9BV86 223 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 RIBC2Q9H4K1 309 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 DCAF13Q9NV06 445 aaKnown RBP13.69□□□□□ -0.22
UBE3B-210ENST00000539599 HCFC1R1Q9NWW0 138 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 MYO15AQ9UKN7 3530 aa13.69□□□□□ -0.22
UBE3B-210ENST00000539599 GFRA2O00451 464 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 SOD2P04179 222 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 HTR1BP28222 390 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 WEE1P30291 646 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 GZMMP51124 257 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 BMXP51813 675 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 IL5RAQ01344 420 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 ZCCHC8Q6NZY4 707 aaKnown RBP13.68□□□□□ -0.22
UBE3B-210ENST00000539599 GALNT18Q6P9A2 607 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 SLC15A4Q8N697 577 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 GIPC3Q8TF64 312 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 HTATIP2Q9BUP3 242 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 ARMC7Q9H6L4 198 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 PCDH12Q9NPG4 1184 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 CREBZFQ9NS37 354 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 B4GALT6Q9UBX8 382 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 STOML2Q9UJZ1 356 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 LOC100130705A0A1B0GUX0 176 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 H0YAE9 185 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 CPNE6O95741 557 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 IGSF6O95976 241 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 GBAP04062 536 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 IL6P05231 212 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 ABRQ12979 859 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 SPATS1Q496A3 300 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 BROXQ5VW32 411 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 Q6ZPB1 254 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-210ENST00000539599 MAL2Q969L2 176 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 CCDC115Q96NT0 180 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 REXO4Q9GZR2 422 aaKnown RBP13.68□□□□□ -0.22
UBE3B-210ENST00000539599 DNAAF2Q9NVR5 837 aaKnown RBP13.68□□□□□ -0.22
UBE3B-210ENST00000539599 TRPS1Q9UHF7 1281 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 PLXNB3Q9ULL4 1909 aa13.68□□□□□ -0.22
UBE3B-210ENST00000539599 C7P10643 843 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 TNFRSF1BP20333 461 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 AOAHP28039 575 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 SERPINA4P29622 427 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 PREPP48147 710 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 CCR3P51677 355 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 MTA1Q13330 715 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 DHRS4L2Q6PKH6 230 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 CYP2U1Q7Z449 544 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 GPR149Q86SP6 731 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 TMEM25Q86YD3 366 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 ALDH16A1Q8IZ83 802 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 DOK1Q99704 481 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 FUNDC2Q9BWH2 189 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 SLC32A1Q9H598 525 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 SH3BP1Q9Y3L3 701 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 GOLGA4Q13439 2230 aaKnown RBP13.67□□□□□ -0.22
UBE3B-210ENST00000539599 RFXANKO14593 260 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 ABCB7O75027 752 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 ETHE1O95571 254 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 CCNA2P20248 432 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 NSG1P42857 185 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 EPHB3P54753 998 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 ILF2Q12905 390 aaKnown RBP13.67□□□□□ -0.22
UBE3B-210ENST00000539599 CHIT1Q13231 466 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 TSTA3Q13630 321 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-210ENST00000539599 DGCR6Q14129 220 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 CYP27C1Q4G0S4 372 aa13.67□□□□□ -0.22
UBE3B-210ENST00000539599 FAM180BQ6P0A1 224 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms