RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 FBXO17Q96EF6 278 aa6.05□□□□□ -1.44
TRAV11-201ENST00000539512 FZD8Q9H461 694 aa6.05□□□□□ -1.44
TRAV11-201ENST00000539512 GRPEL1Q9HAV7 217 aa6.05□□□□□ -1.44
TRAV11-201ENST00000539512 TRPV4Q9HBA0 871 aa6.05□□□□□ -1.44
TRAV11-201ENST00000539512 CHST11Q9NPF2 352 aa6.05□□□□□ -1.44
TRAV11-201ENST00000539512 PPANQ9NQ55 473 aaKnown RBP6.05□□□□□ -1.44
TRAV11-201ENST00000539512 SDR39U1Q9NRG7 319 aaPredicted RBP6.05□□□□□ -1.44
TRAV11-201ENST00000539512 FAM207AQ9NSI2 230 aaPredicted RBP6.05□□□□□ -1.44
TRAV11-201ENST00000539512 KCNJ14Q9UNX9 436 aa6.05□□□□□ -1.44
TRAV11-201ENST00000539512 POMT1Q9Y6A1 747 aa6.05□□□□□ -1.44
TRAV11-201ENST00000539512 IGLV9-49A0A0B4J1Y8 123 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 TRAV34A0A0B4J273 112 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
TRAV11-201ENST00000539512 EPCAMP16422 314 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 IFNAR1P17181 557 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 CSTF2P33240 577 aaKnown RBP eCLIP6.04□□□□□ -1.44
TRAV11-201ENST00000539512 LINC01547P58512 204 aaPredicted RBP6.04□□□□□ -1.44
TRAV11-201ENST00000539512 DLK1P80370 383 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 CDR2Q01850 454 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 NPTX1Q15818 432 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 UGP2Q16851 508 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 UGT3A2Q3SY77 523 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 GTDC1Q4AE62 458 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 LRRC73Q5JTD7 316 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 MFSD6Q6ZSS7 791 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 DNAJB7Q7Z6W7 309 aaPredicted RBP6.04□□□□□ -1.44
TRAV11-201ENST00000539512 DZIP1Q86YF9 867 aaKnown RBP6.04□□□□□ -1.44
TRAV11-201ENST00000539512 MMD2Q8IY49 270 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 KBTBD8Q8NFY9 601 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 VANGL1Q8TAA9 524 aaPredicted RBP6.04□□□□□ -1.44
TRAV11-201ENST00000539512 DEPDC1BQ8WUY9 529 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 SUSD6Q92537 303 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 FAM162AQ96A26 154 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 CENPTQ96BT3 561 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 KATNB1Q9BVA0 655 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 FAM49AQ9H0Q0 323 aaPredicted RBP6.04□□□□□ -1.44
TRAV11-201ENST00000539512 SNX25Q9H3E2 840 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 ZNF112Q9UJU3 913 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 STUB1Q9UNE7 303 aa6.04□□□□□ -1.44
TRAV11-201ENST00000539512 C2orf81A6NN90 581 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 ENO4A6NNW6 628 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 ZNF197O14709 1029 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 CSN3P07498 182 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 RBP5P82980 135 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 ILF2Q12905 390 aaKnown RBP6.03□□□□□ -1.44
TRAV11-201ENST00000539512 BFSP1Q12934 665 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 KIAA1644Q3SXP7 199 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 C6orf136Q5SQH8 315 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 CAVIN1Q6NZI2 390 aaKnown RBP6.03□□□□□ -1.44
TRAV11-201ENST00000539512 SUSD1Q6UWL2 747 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 ABI3BPQ7Z7G0 1075 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 NIPA2Q8N8Q9 360 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 DNASE2BQ8WZ79 361 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 FAM20AQ96MK3 541 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 ADPGKQ9BRR6 497 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 THUMPD3Q9BV44 507 aaKnown RBP6.03□□□□□ -1.44
TRAV11-201ENST00000539512 MTMR12Q9C0I1 747 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 ZMYND12Q9H0C1 365 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 SDF2L1Q9HCN8 221 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 SLC52A3Q9NQ40 469 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 GSN-AS1Q9NRJ2 163 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 P4HTMQ9NXG6 502 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 C19orf25Q9UFG5 118 aaPredicted RBP6.03□□□□□ -1.44
TRAV11-201ENST00000539512 TNNQ9UQP3 1299 aa6.03□□□□□ -1.44
TRAV11-201ENST00000539512 STK36Q9NRP7 1315 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 IGHV4-61A0A0C4DH41 118 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 HTR3EA5X5Y0 456 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 PRR23D1E9PI22 279 aaPredicted RBP6.02□□□□□ -1.45
TRAV11-201ENST00000539512 SNX3O60493 162 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 IGHV4-59P01825 116 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 RPN1P04843 607 aaKnown RBP6.02□□□□□ -1.45
TRAV11-201ENST00000539512 VIMP08670 466 aaKnown RBP6.02□□□□□ -1.45
TRAV11-201ENST00000539512 PRR23D2P0DMB1 279 aaPredicted RBP6.02□□□□□ -1.45
TRAV11-201ENST00000539512 CDKN1AP38936 164 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 PRKCIP41743 596 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 MAZP56270 477 aaKnown RBP6.02□□□□□ -1.45
TRAV11-201ENST00000539512 UBASH3AP57075 661 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 UGCGQ16739 394 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 SLC35D3Q5M8T2 416 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 TRAT1Q6PIZ9 186 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 PHLDB2Q86SQ0 1253 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 TIGD4Q8IY51 512 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 OR52N5Q8NH56 324 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 ZNF524Q96C55 264 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 FAM71F1Q96KD3 344 aaPredicted RBP6.02□□□□□ -1.45
TRAV11-201ENST00000539512 FNBP1Q96RU3 617 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 PITPNM3Q9BZ71 974 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 SIX2Q9NPC8 291 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 WDR83OSQ9Y284 106 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 TAF1P21675 1872 aa6.02□□□□□ -1.45
TRAV11-201ENST00000539512 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.01□□□□□ -1.45
TRAV11-201ENST00000539512 A0A1W2PPW3 197 aa6.01□□□□□ -1.45
TRAV11-201ENST00000539512 EPHB6O15197 1021 aa6.01□□□□□ -1.45
TRAV11-201ENST00000539512 LINC01565O15544 149 aa6.01□□□□□ -1.45
TRAV11-201ENST00000539512 CLPTM1O96005 669 aa6.01□□□□□ -1.45
TRAV11-201ENST00000539512 CHRNB4P30926 498 aa6.01□□□□□ -1.45
TRAV11-201ENST00000539512 HOXC8P31273 242 aa6.01□□□□□ -1.45
TRAV11-201ENST00000539512 POU5F1Q01860 360 aaKnown RBP6.01□□□□□ -1.45
TRAV11-201ENST00000539512 TAF10Q12962 218 aa6.01□□□□□ -1.45
TRAV11-201ENST00000539512 SPDYCQ5MJ68 293 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms