RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ZFYP08048 801 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 FAM58BPP0C7Q3 252 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 C8orf89P0DMQ9 161 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 HLA-DOBP13765 273 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CHRNB2P17787 502 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 EPORP19235 508 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CORO1AP31146 461 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 STX2P32856 288 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 DUTP33316 252 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 NR4A2P43354 598 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 RIPPLY3P57055 190 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ISL1P61371 349 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CTAG1AP78358 180 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 IRX4P78413 519 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF91Q05481 1191 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 AP1B1Q10567 949 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 DHX34Q14147 1143 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 VEPH1Q14D04 833 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TAF13Q15543 124 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF674Q2M3X9 581 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 WSCD2Q2TBF2 565 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ACSF3Q4G176 576 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TPGS2Q68CL5 300 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF772Q68DY9 489 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF425Q6IV72 752 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 LEG1Q6P5S2 330 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF790Q6PG37 636 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 FIGLAQ6QHK4 219 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 C9orf47Q6ZRZ4 202 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PAQR9Q6ZVX9 377 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ANKRD33Q7Z3H0 272 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SYVN1Q86TM6 617 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 MB21D2Q8IYB1 491 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 L3MBTL4Q8NA19 623 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 KBTBD3Q8NAB2 608 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TBC1D16Q8TBP0 767 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 KIAA1524Q8TCG1 905 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ASB5Q8WWX0 329 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PTERQ96BW5 349 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ZC3HAV1LQ96H79 300 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CNDP2Q96KP4 475 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 NLRP4Q96MN2 994 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PCDHB18PQ96TA0 734 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 MAP3K3Q99759 626 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SSX3Q99909 188 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 FAM213AQ9BRX8 229 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 NAA11Q9BSU3 229 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 IFT27Q9BW83 186 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 NMNAT2Q9BZQ4 307 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SLCO5A1Q9H2Y9 848 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 COPS7BQ9H9Q2 264 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 EQTNQ9NQ60 294 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 HINT3Q9NQE9 182 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 DCAF16Q9NXF7 216 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TAS2R14Q9NYV8 317 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ABT1Q9ULW3 272 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PCF11O94913 1555 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TOP2BQ02880 1626 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ADAMTS7Q9UKP4 1686 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 C2orf81A6NN90 581 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 FAM220BPB1ANY3 271 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SLC33A1O00400 549 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 MCF2LO15068 1137 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 INSIG1O15503 277 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 GRID2O43424 1007 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 VEGFDO43915 354 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 GPR137BO60478 399 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 KHDRBS3O75525 346 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CALCAP01258 141 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 GBAP04062 536 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 APOA4P06727 396 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ERCC2P18074 760 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PIK3CAP42336 1068 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 MRPL12P52815 198 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 COG7P83436 770 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 MZT1Q08AG7 82 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 RIGQ13278 110 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SGCGQ13326 291 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TAZQ16635 292 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 FAM98BQ52LJ0 330 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 XKR3Q5GH77 459 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CENPPQ6IPU0 288 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 MACC1Q6ZN28 852 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF534Q76KX8 674 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CAMKMTQ7Z624 323 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 YTHDF3Q7Z739 585 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 RPAINQ86UA6 219 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 RANBP3LQ86VV4 465 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ZDHHC17Q8IUH5 632 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SPATA6LQ8N4H0 392 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 RFLNBQ8N5W9 214 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TMCO5AQ8N6Q1 288 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 GVQW1Q8N7I0 195 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 BOLLQ8N9W6 283 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 IQUBQ8NA54 791 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 FAM71CQ8NEG0 241 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 OR8K5Q8NH50 307 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 DYRK2Q92630 601 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 LPAR1Q92633 364 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ATP6V0A1Q93050 837 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms