RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 PTCHD3Q3KNS1 767 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 HHATQ5VTY9 493 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 KIAA2013Q8IYS2 634 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 ADGRF3Q8IZF5 1079 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 OR56A3Q8NH54 315 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 IFI44Q8TCB0 444 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 UBTD2Q8WUN7 234 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 NAT6Q93015 286 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 TMEM237Q96Q45 408 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 ACSS2Q9NR19 701 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 SPHK1Q9NYA1 384 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 OR6C2Q9NZP2 312 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 OGFRQ9NZT2 677 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 FAM221BA6H8Z2 402 aa22.74■■□□□ 1.23
TMEM260-202ENST00000538838 ZNF839A8K0R7 811 aa22.74■■□□□ 1.23
TMEM260-202ENST00000538838 CASC3O15234 703 aaKnown RBP22.74■■□□□ 1.23
TMEM260-202ENST00000538838 CHRM5P08912 532 aaPredicted RBP22.74■■□□□ 1.23
TMEM260-202ENST00000538838 EEF1DP29692 281 aaKnown RBP22.74■■□□□ 1.23
TMEM260-202ENST00000538838 PEBP1P30086 187 aaKnown RBP22.74■■□□□ 1.23
TMEM260-202ENST00000538838 GPR3P46089 330 aa22.74■■□□□ 1.23
TMEM260-202ENST00000538838 SLC6A12P48065 614 aa22.74■■□□□ 1.23
TMEM260-202ENST00000538838 DUSP3P51452 185 aaPredicted RBP22.74■■□□□ 1.23
TMEM260-202ENST00000538838 EPHA4P54764 986 aa22.74■■□□□ 1.23
TMEM260-202ENST00000538838 HMGCLL1Q8TB92 370 aa22.74■■□□□ 1.23
TMEM260-202ENST00000538838 CCDC177Q9NQR7 707 aaPredicted RBP22.74■■□□□ 1.23
TMEM260-202ENST00000538838 EVA1BQ9NVM1 165 aa22.74■■□□□ 1.23
TMEM260-202ENST00000538838 OXSMQ9NWU1 459 aa22.74■■□□□ 1.23
TMEM260-202ENST00000538838 IGHV1OR21-1A0A087WYE8 117 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 A0A1W2PPV9 198 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 WDR91A4D1P6 747 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 STX16-NPEPL1H3BU86 382 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 STX16O14662 325 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 PROS1P07225 676 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 BPGMP07738 259 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 CHN1P15882 459 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 CKMT2P17540 419 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 POLR2CP19387 275 aaPredicted RBP22.73■■□□□ 1.23
TMEM260-202ENST00000538838 PSMB5P28074 263 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 GGT5P36269 586 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 PPM1FP49593 454 aaPredicted RBP22.73■■□□□ 1.23
TMEM260-202ENST00000538838 ATP1A2P50993 1020 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 PRKAA2P54646 552 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 SPRED1Q7Z699 444 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 OOSP2Q86WS3 158 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 SLC22A9Q8IVM8 553 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 SMPDL3AQ92484 453 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 CCDC126Q96EE4 140 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 CCDC3Q9BQI4 270 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 CD244Q9BZW8 370 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 CNOT10Q9H9A5 744 aaKnown RBP22.73■■□□□ 1.23
TMEM260-202ENST00000538838 DMXL1Q9Y485 3027 aa22.73■■□□□ 1.23
TMEM260-202ENST00000538838 OR5K3A6NET4 321 aa22.72■■□□□ 1.23
TMEM260-202ENST00000538838 CCNT2O60583 730 aaKnown RBP22.72■■□□□ 1.23
TMEM260-202ENST00000538838 WDR47O94967 919 aa22.72■■□□□ 1.23
TMEM260-202ENST00000538838 PNLIPP16233 465 aa22.72■■□□□ 1.23
TMEM260-202ENST00000538838 AMD1P17707 334 aa22.72■■□□□ 1.23
TMEM260-202ENST00000538838 OAS2P29728 719 aaKnown RBP22.72■■□□□ 1.23
TMEM260-202ENST00000538838 CAPZBP47756 277 aa22.72■■□□□ 1.23
TMEM260-202ENST00000538838 LIMK1P53667 647 aa22.72■■□□□ 1.23
TMEM260-202ENST00000538838 NKAIN2Q5VXU1 208 aa22.72■■□□□ 1.23
TMEM260-202ENST00000538838 RAB44Q7Z6P3 723 aaPredicted RBP22.72■■□□□ 1.23
TMEM260-202ENST00000538838 MOCOSQ96EN8 888 aa22.72■■□□□ 1.23
TMEM260-202ENST00000538838 SGPP1Q9BX95 441 aa22.72■■□□□ 1.23
TMEM260-202ENST00000538838 INTS7Q9NVH2 962 aaKnown RBP22.72■■□□□ 1.23
TMEM260-202ENST00000538838 HRASLS2Q9NWW9 162 aa22.72■■□□□ 1.23
TMEM260-202ENST00000538838 PIPSLA2A3N6 862 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 GSAPA4D1B5 854 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 B4GAT1O43505 415 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 STK16O75716 305 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 PPP1CAP62136 330 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 HERVK_113P63132 956 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 AMZ1Q400G9 498 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 LIPMQ5VYY2 423 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 CAPN13Q6MZZ7 669 aaPredicted RBP22.71■■□□□ 1.23
TMEM260-202ENST00000538838 RPS27LQ71UM5 84 aaKnown RBP22.71■■□□□ 1.23
TMEM260-202ENST00000538838 PIP4P1Q86T03 277 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 ERVK-6Q9BXR3 956 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 TWSG1Q9GZX9 223 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 RPS17P08708 135 aaKnown RBP22.71■■□□□ 1.23
TMEM260-202ENST00000538838 ACP1P24666 158 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 PCBP2Q15366 365 aaKnown RBP eCLIP22.71■■□□□ 1.23
TMEM260-202ENST00000538838 ZNF678Q5SXM1 525 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 THEMIS2Q5TEJ8 643 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 PRAMEF13Q5VWM6 474 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 THOC6Q86W42 341 aaKnown RBP22.71■■□□□ 1.23
TMEM260-202ENST00000538838 NUDCD3Q8IVD9 361 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 KLHDC8AQ8IYD2 350 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 L3HYPDHQ96EM0 354 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 AHCYL2Q96HN2 611 aaKnown RBP22.71■■□□□ 1.23
TMEM260-202ENST00000538838 OR4K3Q96R72 315 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 ACAT2Q9BWD1 397 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 PITPNM3Q9BZ71 974 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 ACTR10Q9NZ32 417 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 OPTCQ9UBM4 332 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 TAC3Q9UHF0 121 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 PCTPQ9UKL6 214 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 SLC22A14Q9Y267 594 aa22.71■■□□□ 1.23
TMEM260-202ENST00000538838 TNPO3Q9Y5L0 923 aaKnown RBP22.71■■□□□ 1.23
TMEM260-202ENST00000538838 ISM1B1AKI9 464 aa22.7■■□□□ 1.22
TMEM260-202ENST00000538838 DUX1O43812 170 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms