RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 GALPQ9UBC7 116 aa14.4□□□□□ -0.1
RAB40B-202ENST00000538809 ANAPC2Q9UJX6 822 aa14.4□□□□□ -0.1
RAB40B-202ENST00000538809 PLCL2Q9UPR0 1127 aa14.4□□□□□ -0.1
RAB40B-202ENST00000538809 UBR5O95071 2799 aaPredicted RBP14.39□□□□□ -0.11
RAB40B-202ENST00000538809 SETXQ7Z333 2677 aaKnown RBP14.39□□□□□ -0.11
RAB40B-202ENST00000538809 ASH1LQ9NR48 2969 aaKnown RBP14.39□□□□□ -0.11
RAB40B-202ENST00000538809 DNALI1O14645 258 aaPredicted RBP14.39□□□□□ -0.11
RAB40B-202ENST00000538809 KPNA5O15131 536 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 USP1O94782 785 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 S1PR4O95977 384 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 ESR1P03372 595 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 FOXL2P58012 376 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 MLIPQ5VWP3 458 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 FCRL6Q6DN72 434 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 ZNF470Q6ECI4 717 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 RHBDD2Q6NTF9 364 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 TCTN3Q6NUS6 607 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 TTC23LQ6PF05 361 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 ASB18Q6ZVZ8 466 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 DENND1AQ8TEH3 1009 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 GBP5Q96PP8 586 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 RAB11FIP5Q9BXF6 653 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 ING2Q9H160 280 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 ACSS2Q9NR19 701 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 TXLNGQ9NUQ3 528 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 EURLQ9NYK6 297 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 MED16Q9Y2X0 877 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 AP1M2Q9Y6Q5 423 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 DOPEY2Q9Y3R5 2298 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 SHANK1Q9Y566 2161 aa14.39□□□□□ -0.11
RAB40B-202ENST00000538809 H3BMM5 538 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 PFDN6O15212 129 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 NRP2O60462 931 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 CHRM3P20309 590 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 ATP5DP30049 168 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 OTX2P32243 289 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 GRIA3P42263 894 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 CCL11P51671 97 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 GNG11P61952 73 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 KLRB1Q12918 225 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 ATP1A4Q13733 1029 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 SF1Q15637 639 aaKnown RBP14.38□□□□□ -0.11
RAB40B-202ENST00000538809 ACSBG2Q5FVE4 666 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 TLDC1Q6P9B6 456 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 FIGLAQ6QHK4 219 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 TMEM151BQ8IW70 566 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 DENND6AQ8IWF6 608 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 ZBTB2Q8N680 514 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 ANP32BQ92688 251 aaKnown RBP14.38□□□□□ -0.11
RAB40B-202ENST00000538809 RAD51AP1Q96B01 352 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 SLC22A18Q96BI1 424 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 FOPNLQ96NB1 174 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 NAPGQ99747 312 aaPredicted RBP14.38□□□□□ -0.11
RAB40B-202ENST00000538809 MIPEPQ99797 713 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 DPH2Q9BQC3 489 aaPredicted RBP14.38□□□□□ -0.11
RAB40B-202ENST00000538809 FBXO6Q9NRD1 293 aaPredicted RBP14.38□□□□□ -0.11
RAB40B-202ENST00000538809 INTS10Q9NVR2 710 aaKnown RBP14.38□□□□□ -0.11
RAB40B-202ENST00000538809 GPN3Q9UHW5 284 aaPredicted RBP14.38□□□□□ -0.11
RAB40B-202ENST00000538809 SRPK3Q9UPE1 567 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 PADI2Q9Y2J8 665 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 MAD1L1Q9Y6D9 718 aa14.38□□□□□ -0.11
RAB40B-202ENST00000538809 FLNBO75369 2602 aaKnown RBP14.37□□□□□ -0.11
RAB40B-202ENST00000538809 CTAGE9A4FU28 777 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 ARHGEF33A8MVX0 844 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 E5RI56 91 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 PRICKLE3O43900 615 aaPredicted RBP14.37□□□□□ -0.11
RAB40B-202ENST00000538809 MATN4O95460 622 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 PKMP14618 531 aaKnown RBP14.37□□□□□ -0.11
RAB40B-202ENST00000538809 MCM3P25205 808 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 SLC1A2P43004 574 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 CTBP1Q13363 440 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 THOC5Q13769 683 aaKnown RBP14.37□□□□□ -0.11
RAB40B-202ENST00000538809 FASTKQ14296 549 aaKnown RBP14.37□□□□□ -0.11
RAB40B-202ENST00000538809 PPP1R7Q15435 360 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 IGFBP7Q16270 282 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.37□□□□□ -0.11
RAB40B-202ENST00000538809 RAB43Q86YS6 212 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 MCATQ8IVS2 390 aaKnown RBP14.37□□□□□ -0.11
RAB40B-202ENST00000538809 PROKR1Q8TCW9 393 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 CAPZA3Q96KX2 299 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 SLC30A3Q99726 388 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 NDC1Q9BTX1 674 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 SLC25A23Q9BV35 468 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 INTS7Q9NVH2 962 aaKnown RBP14.37□□□□□ -0.11
RAB40B-202ENST00000538809 IFT80Q9P2H3 777 aaPredicted RBP14.37□□□□□ -0.11
RAB40B-202ENST00000538809 NDOR1Q9UHB4 597 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 PTRH2Q9Y3E5 179 aaKnown RBP14.37□□□□□ -0.11
RAB40B-202ENST00000538809 SAR1BQ9Y6B6 198 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 FAM169AQ9Y6X4 670 aa14.37□□□□□ -0.11
RAB40B-202ENST00000538809 A0A1W2PPV9 198 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 CNOT3O75175 753 aaKnown RBP14.36□□□□□ -0.11
RAB40B-202ENST00000538809 BANF1O75531 89 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 KLF7O75840 302 aaPredicted RBP14.36□□□□□ -0.11
RAB40B-202ENST00000538809 CCNFP41002 786 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 FOLR3P41439 243 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 CLCN7P51798 805 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 PGDP52209 483 aa14.36□□□□□ -0.11
RAB40B-202ENST00000538809 YBX1P67809 324 aaKnown RBP14.36□□□□□ -0.11
RAB40B-202ENST00000538809 DCDP81605 110 aaKnown RBP14.36□□□□□ -0.11
RAB40B-202ENST00000538809 MPP1Q00013 466 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms