RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 SLC26A1Q9H2B4 701 aa8.31□□□□□ -1.08
DDB1-212ENST00000538470 WDR54Q9H977 334 aa8.31□□□□□ -1.08
DDB1-212ENST00000538470 MRM3Q9HC36 420 aaKnown RBP8.31□□□□□ -1.08
DDB1-212ENST00000538470 TREX1Q9NSU2 369 aa8.31□□□□□ -1.08
DDB1-212ENST00000538470 P4HTMQ9NXG6 502 aa8.31□□□□□ -1.08
DDB1-212ENST00000538470 IL1RAPL1Q9NZN1 696 aa8.31□□□□□ -1.08
DDB1-212ENST00000538470 SPATA7Q9P0W8 599 aa8.31□□□□□ -1.08
DDB1-212ENST00000538470 DHCR7Q9UBM7 475 aaKnown RBP8.31□□□□□ -1.08
DDB1-212ENST00000538470 SLC39A10Q9ULF5 831 aa8.31□□□□□ -1.08
DDB1-212ENST00000538470 B3GNT3Q9Y2A9 372 aa8.31□□□□□ -1.08
DDB1-212ENST00000538470 KLK4Q9Y5K2 254 aa8.31□□□□□ -1.08
DDB1-212ENST00000538470 POLEQ07864 2286 aa8.31□□□□□ -1.08
DDB1-212ENST00000538470 A0A0U1RQJ8 604 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 FITM1A5D6W6 292 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 A6NL46 340 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 TARM1B6A8C7 271 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 H3BMM5 538 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 AGPSO00116 658 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 DSCR3O14972 297 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 PFDN6O15212 129 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 CD3EAPO15446 510 aaKnown RBP8.3□□□□□ -1.08
DDB1-212ENST00000538470 CNOT3O75175 753 aaKnown RBP8.3□□□□□ -1.08
DDB1-212ENST00000538470 DDAH2O95865 285 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 UMODP07911 640 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 MMP11P24347 488 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 CSE1LP55060 971 aaKnown RBP8.3□□□□□ -1.08
DDB1-212ENST00000538470 CDK16Q00536 496 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 AIMP2Q13155 320 aaKnown RBP8.3□□□□□ -1.08
DDB1-212ENST00000538470 GRM7Q14831 915 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 CCNG2Q16589 344 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 MEI1Q5TIA1 1274 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 PTRHD1Q6GMV3 140 aaKnown RBP8.3□□□□□ -1.08
DDB1-212ENST00000538470 OTOAQ7RTW8 1153 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 PPP1R32Q7Z5V6 425 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 MAGEC3Q8TD91 643 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 C1orf54Q8WWF1 131 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 ZUFSPQ96AP4 578 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 RAD51AP1Q96B01 352 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 FOPNLQ96NB1 174 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 ZNF285Q96NJ3 590 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 IL17FQ96PD4 163 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 SELENOSQ9BQE4 189 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 ATP13A2Q9NQ11 1180 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 CHRAC1Q9NRG0 131 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 BFARQ9NZS9 450 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.3□□□□□ -1.08
DDB1-212ENST00000538470 GUCA1BQ9UMX6 200 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 NOTCH2Q04721 2471 aa8.3□□□□□ -1.08
DDB1-212ENST00000538470 UTP20O75691 2785 aaKnown RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 IQCF5A8MTL0 148 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 TCP11X1B4DZS4 312 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 PRICKLE3O43900 615 aaPredicted RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 SRPX2O60687 465 aaPredicted RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 PHF2O75151 1096 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 NDUFS3O75489 264 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 CTSBP07858 339 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 TPSB2P20231 275 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 ITGAXP20702 1163 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 OGNP20774 298 aaKnown RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 RPL22P35268 128 aaKnown RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 NPY2RP49146 381 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 ADARP55265 1226 aaKnown RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 SESN2P58004 480 aaPredicted RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 BASP1P80723 227 aaKnown RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 SNX1Q13596 522 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 RAPSNQ13702 412 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 GBX1Q14549 363 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 SLC9A5Q14940 896 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 RPS6KA1Q15418 735 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 SIX1Q15475 284 aaPredicted RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 SF1Q15637 639 aaKnown RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 TPSAB1Q15661 275 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 TYSND1Q2T9J0 566 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 PRR30Q53SZ7 412 aaPredicted RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 IRAK1BP1Q5VVH5 260 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 FCRL6Q6DN72 434 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 MRNIPQ6NTE8 343 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 PRMT9Q6P2P2 845 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 FIGLAQ6QHK4 219 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 ZNF662Q6ZS27 426 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 TTLL10Q6ZVT0 673 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 COX15Q7KZN9 410 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 RNF44Q7L0R7 432 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 OVCH1Q7RTY7 1134 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 TAX1BP1Q86VP1 789 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 MCATQ8IVS2 390 aaKnown RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 KRT222Q8N1A0 295 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 ZADH2Q8N4Q0 377 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 LMNTD1Q8N9Z9 388 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 CFAP61Q8NHU2 1237 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 PPP4R1Q8TF05 950 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 SPSB2Q99619 263 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 KIFC1Q9BW19 673 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 MFRPQ9BY79 579 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 ILKAPQ9H0C8 392 aaPredicted RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 ZNF552Q9H707 407 aaPredicted RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 SEMA3GQ9NS98 782 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 SLC22A11Q9NSA0 550 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 HOMER3Q9NSC5 361 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 CUTCQ9NTM9 273 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms