RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 DESI2Q9BSY9 194 aa16.04■□□□□ 0.16
PTPN6-210ENST00000538318 ILKAPQ9H0C8 392 aaPredicted RBP16.04■□□□□ 0.16
PTPN6-210ENST00000538318 RBSNQ9H1K0 784 aa16.04■□□□□ 0.16
PTPN6-210ENST00000538318 SLC26A1Q9H2B4 701 aa16.04■□□□□ 0.16
PTPN6-210ENST00000538318 ZBTB20Q9HC78 741 aaPredicted RBP16.04■□□□□ 0.16
PTPN6-210ENST00000538318 RAB6BQ9NRW1 208 aa16.04■□□□□ 0.16
PTPN6-210ENST00000538318 INTS7Q9NVH2 962 aaKnown RBP16.04■□□□□ 0.16
PTPN6-210ENST00000538318 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.04■□□□□ 0.16
PTPN6-210ENST00000538318 CIDEBQ9UHD4 219 aa16.04■□□□□ 0.16
PTPN6-210ENST00000538318 ZNF148Q9UQR1 794 aa16.04■□□□□ 0.16
PTPN6-210ENST00000538318 MDC1Q14676 2089 aaKnown RBP16.03■□□□□ 0.16
PTPN6-210ENST00000538318 PRMT5O14744 637 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-210ENST00000538318 RASGRF2O14827 1237 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 DSCR3O14972 297 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 FKBP9O95302 570 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 PIM1P11309 404 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-210ENST00000538318 ETS1P14921 441 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 GRIA3P42263 894 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 TTPAP49638 278 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 SF1Q15637 639 aaKnown RBP16.03■□□□□ 0.16
PTPN6-210ENST00000538318 NKG7Q16617 165 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 ZC3H12BQ5HYM0 836 aaKnown RBP16.03■□□□□ 0.16
PTPN6-210ENST00000538318 TCTE1Q5JU00 501 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 FIGLAQ6QHK4 219 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 PRUNE1Q86TP1 453 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 LDB1Q86U70 411 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-210ENST00000538318 C2orf73Q8N5S3 287 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-210ENST00000538318 RNF10Q8N5U6 811 aaKnown RBP16.03■□□□□ 0.16
PTPN6-210ENST00000538318 ZNF285Q96NJ3 590 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 SPSB2Q99619 263 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 CHRAC1Q9NRG0 131 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 CUTCQ9NTM9 273 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 CATSPERZQ9NTU4 200 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 MARCH4Q9P2E8 410 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-210ENST00000538318 ERRFI1Q9UJM3 462 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-210ENST00000538318 ANAPC5Q9UJX4 755 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 PCDHGA10Q9Y5H3 936 aa16.03■□□□□ 0.16
PTPN6-210ENST00000538318 CNTRLQ7Z7A1 2325 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 FITM1A5D6W6 292 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 TARM1B6A8C7 271 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 SOCS6O14544 535 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 PRICKLE3O43900 615 aaPredicted RBP16.02■□□□□ 0.16
PTPN6-210ENST00000538318 APRTP07741 180 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 ITGA3P26006 1051 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 GRM7Q14831 915 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 PCID2Q5JVF3 399 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 SEL1L2Q5TEA6 688 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 PRAMEF13Q5VWM6 474 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 COX15Q7KZN9 410 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 CUZD1Q86UP6 607 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 TAX1BP1Q86VP1 789 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 SLC13A5Q86YT5 568 aaPredicted RBP16.02■□□□□ 0.16
PTPN6-210ENST00000538318 KRT222Q8N1A0 295 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 PPHLN1Q8NEY8 458 aaKnown RBP16.02■□□□□ 0.16
PTPN6-210ENST00000538318 UBE2Q2Q8WVN8 375 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 C1orf54Q8WWF1 131 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 ZUFSPQ96AP4 578 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 RAB11FIP5Q9BXF6 653 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 P2RY12Q9H244 342 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 SLC6A20Q9NP91 592 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 PAK5Q9P286 719 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 CDC23Q9UJX2 597 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 FBXL4Q9UKA2 621 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 SLC39A10Q9ULF5 831 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 KLK4Q9Y5K2 254 aa16.02■□□□□ 0.16
PTPN6-210ENST00000538318 COPG1Q9Y678 874 aaKnown RBP16.02■□□□□ 0.16
PTPN6-210ENST00000538318 POLEQ07864 2286 aa16.02■□□□□ 0.15
PTPN6-210ENST00000538318 CENPEQ02224 2701 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 ITPR2Q14571 2701 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 A1L4Q6 167 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 ANKUB1A6NFN9 424 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 CD3EAPO15446 510 aaKnown RBP16.01■□□□□ 0.15
PTPN6-210ENST00000538318 LDLRP01130 860 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 MCM3P25205 808 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 TMED2Q15363 201 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 TTC23LQ6PF05 361 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 IGFL2Q6UWQ7 119 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 CCDC89Q8N998 374 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 HMGCLL1Q8TB92 370 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 RAD51AP1Q96B01 352 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 PANX3Q96QZ0 392 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 WDR77Q9BQA1 342 aaPredicted RBP16.01■□□□□ 0.15
PTPN6-210ENST00000538318 SELENOSQ9BQE4 189 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 MRM3Q9HC36 420 aaKnown RBP16.01■□□□□ 0.15
PTPN6-210ENST00000538318 TREX1Q9NSU2 369 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 IL1RAPL1Q9NZN1 696 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 NXT1Q9UKK6 140 aaKnown RBP16.01■□□□□ 0.15
PTPN6-210ENST00000538318 HS3ST3B1Q9Y662 390 aa16.01■□□□□ 0.15
PTPN6-210ENST00000538318 KPNA5O15131 536 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 SRPX2O60687 465 aaPredicted RBP16■□□□□ 0.15
PTPN6-210ENST00000538318 CTSVO60911 334 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 C1orf105O95561 183 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 RPS3P23396 243 aaKnown RBP eCLIP16■□□□□ 0.15
PTPN6-210ENST00000538318 GLRBP48167 497 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 SNX1Q13596 522 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 FAM214AQ32MH5 1076 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 PTRHD1Q6GMV3 140 aaKnown RBP16■□□□□ 0.15
PTPN6-210ENST00000538318 KIRREL2Q6UWL6 708 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 MPP5Q8N3R9 675 aa16■□□□□ 0.15
PTPN6-210ENST00000538318 TTC29Q8NA56 475 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms