RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	NUSAP1	Q9BXS6	441 aa	Known RBP	4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	NELFA	Q9H3P2	528 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	FAM83D	Q9H4H8	585 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	RABEP2	Q9H5N1	569 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	WDR26	Q9H7D7	661 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	CNOT10	Q9H9A5	744 aa	Known RBP	4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	TMBIM4	Q9HC24	238 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	EPB41L5	Q9HCM4	733 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	TM9SF3	Q9HD45	589 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	BPIFA1	Q9NP55	256 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	FZD3	Q9NPG1	666 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	CASS4	Q9NQ75	786 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	FAM114A2	Q9NRY5	505 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	MTRF1L	Q9UGC7	380 aa	Known RBP	4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	CD84	Q9UIB8	345 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	APPL1	Q9UKG1	709 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	PILRB	Q9UKJ0	227 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZFR2	Q9UPR6	939 aa	Known RBP	4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	SNX24	Q9Y343	169 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	TCAF1	Q9Y4C2	921 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	NUMA1	Q14980	2115 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	CEP192	Q8TEP8	1941 aa		4.25	□□□□□ -1.73
SNHG1-208	ENST00000538266	FANCM	Q8IYD8	2048 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	SPAG17	Q6Q759	2223 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	GLYATL1P3	A0A0U1RQE8	302 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266		A0A1W2PRX2	142 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	TCRBV7S3A2	A0A539	114 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	MAGEB16	A2A368	324 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	KLHL33	A6NCF5	533 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	GMNC	A6NCL1	334 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	TOR1B	O14657	336 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	VILL	O15195	856 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	PFDN6	O15212	129 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	INPP4B	O15327	924 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	FOXS1	O43638	330 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	LDB2	O43679	373 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	BUD23	O43709	281 aa	Known RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	SRP72	O76094	671 aa	Known RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	EPN2	O95208	641 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	SLC25A14	O95258	325 aa	Predicted RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	TTC4	O95801	387 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	CER1	O95813	267 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	POLB	P06746	335 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	RET	P07949	1114 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	THEGL	P0DJG4	465 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	RALB	P11234	206 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	OSM	P13725	252 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	PGAM1	P18669	254 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	KEL	P23276	732 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	IVD	P26440	423 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	AKT1	P31749	480 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	HSD17B3	P37058	310 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	PPARG	P37231	505 aa	Predicted RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	MTNR1B	P49286	362 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	ARRB1	P49407	418 aa	Predicted RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	CSNK1E	P49674	416 aa	Known RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZNF140	P52738	457 aa	Predicted RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	ATXN3	P54252	364 aa	Predicted RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	DRG2	P55039	364 aa	Known RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	PLTP	P55058	493 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	EIF3B	P55884	814 aa	Known RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	CLDN2	P57739	230 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	YPEL5	P62699	121 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	CDK3	Q00526	305 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	DPT	Q07507	201 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZNF844	Q08AG5	666 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	PDIA2	Q13087	525 aa	Known RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	NFATC2	Q13469	925 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	GTF2H3	Q13889	308 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	PDE1C	Q14123	709 aa	Predicted RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	PTK2B	Q14289	1009 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	FGL2	Q14314	439 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	ACAP2	Q15057	778 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	CDKN3	Q16667	212 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	DUOXA1	Q1HG43	343 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	FAM153C	Q494X1	144 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	GAGE13	Q4V321	117 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZRANB3	Q5FWF4	1079 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	AARS2	Q5JTZ9	985 aa	Known RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	PCID2	Q5JVF3	399 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	TSTD2	Q5T7W7	516 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	HENMT1	Q5T8I9	393 aa	Known RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	DUPD1	Q68J44	220 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	PDPK2P	Q6A1A2	396 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	PNCK	Q6P2M8	343 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	AFTPH	Q6ULP2	937 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	IL27RA	Q6UWB1	636 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	FAM180A	Q6UWF9	173 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	LAYN	Q6UX15	382 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	KYAT3	Q6YP21	454 aa	Known RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266		Q6ZSR6	202 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZNF534	Q76KX8	674 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	TECPR1	Q7Z6L1	1165 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	CROCCP2	Q86T23	111 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	CAND1	Q86VP6	1230 aa	Known RBP	4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	IQCH	Q86VS3	1027 aa		4.24	□□□□□ -1.73
SNHG1-208	ENST00000538266	HEATR4	Q86WZ0	1026 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms